Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g1232 ATGAGTTCTTCAAATGGAGGAAAGGGTGATTCTGATGGCGATAAGCACAACAAAAACAAAAACAAGGGAAAATCATCATCTTCCTCTAGTATCACTTCAGAACAAAATTCATATTTGGAAGAATTTTTTGAATGTTGCCAACACCCAGAAGAAATCCAAGAAGAAGAATTGGCAAAGCTTCTAGGGCTTCAGAGGGAGCAAGTAGCTAAGTGGTTTCATGACAAAAGAACCCAAGCACAAGCACAGGTTGCTCAATCTGAGCCAAAGTTTCCTATTCTTGAAAGTTCACAAGAAGAAGTTGTTCCAAAGCCATTAGAAAGATCACCAACCCCAAATGTGATTCCTGGTGAAGCTGAAGAGTTCCTTAAGGAGAAATCTAGGATGTTGGAGATTGCAAAATCTGGCTATGAAGAACTGAACAAGCTCTTCCAGAATGAGTCTCTATGGGTCAAGTCTTCACTTGATGGGAGAATGGTTCTTGATACTGAAAAATATAAGCAAATGTTTCCAAGGGACACTAATCCTAATGTGTTCAAAACATCTCAAACTCGTGAGGAATCTTCCAAAGCTTCAACCGTAGTGTCCACCACTCTTGCCAACAAATTGTTTGAGGCCTTATTATCTGATCCGAAAGGATTGGGTGAGTTGTTCCCAACAATGGTTCAAAGGGCAGAGATAATACAAGAGTATGAACATGGGACAAATGAAACTAAACATGGAACCTTATTGTTGATGTATTTAGAAACCCACCATCTTTCACCTCTAATGATACCTAGGAAGTACTTCTTCCTTAGATATTGTGAACATGTTCATGGTTCAGGAACATGGGTGATATCTGATGTGTCACTTGACTCATTAGGAGGGAACCTCCCTCATTCACCCTGTTGGAAGTTTCCCTCTGGATGCCGCATTCGTCATTTGCCTCCTGATCAAAATGGAAGGAATACTACCTTGGTTGAATGGATTGAGCATGTGGAAGTGAATGACATCCCCCAAACAAACTCGCTATATAGAGATGTTGTTGCAAACAACATTCCATTTTCAGCAGGCAGGTGGATTATGTTCCTTCTCAAGAACAATGAGAAGTTATTTCACTGCCAAGCCATTTACAATAATGAAGCAGTCCTTATTGAAGGAAGGGGTTTGCTACAAATTTCTCATCGAATGGTTCGGAGTTTTTGTCAAATTCTGAACATGTCAGGGAAGCCAGAAATCACACATTTTACCCAGCCACCAAGCAACACCAACAGTAAGAATAGTAATAATAGTTATTATGGTGGTGAGATTAAGTACTCTCTTCACAAGAACTCTGCACCTGGCCATCCAATAGGCATGATTGCCAGCCTTGTTACCTCTTTTTGGGTTCCTCTCAATTTTCATGAGGTCTTTTGCTTCCTCACTGATGCCACTAAGCGAAATCAGTGGGATACTCTGTGCACAGGACATTGTGCTTTTGAGGTTGCAAATTTGCAAACTGGAGACTATATTGGCAACCGTATTTCTGTTATTCGGCAAGATTTGCCGATGATTTTCAATTTCACACAGCCTTGTGGTGAGCATGAAAAAAATGAGATGATAATTCTTCAAGAAAGCTCCATAGACCCAGTTGAAGCCTACATAGTGTATGCACCCATTGCCAGAAGCAACATGCACTTGCTCTTGAATAGGAATAGTGGTCCTGTTTCTTCAGAGATCGAAGTTCTCTCCTCCGGCTTTGCGCTCACCGGCGATGCCAATTCAGTCGCCGGTTTAATGAAGAGAGCCGGTATGCCGGATTATCAACAACAATTCGGCACACTCTTAACCATGGCTTACCAGATACCTGTCTCTAGCACACCATCTACTAAAATGTTGAAGATGAAAAATTTGGAGGTTGCCCATAACATTTTCCGCATTATGGCAGTAGGCACAATGAGAATCCTCCAACGCCTTCCCTCAAAACCCACCATTTCCAAACTCATCTATTCTCCCTTTTCTTTTTCTTCTTCTTCTTCTTCAATTCAACCCCTATCACCTTCTCTAACAGCTGAACAGCTCTCCATGTTCAACGACCTCATCCCCCGCCTCTGCCACCACTCCGACCACCACGACCACCTCCCCACCGCCATCCGCCTCACCGCAACCGCCCTCCTCACTAACCCCTCTCTCCACTCCCTCCATCTCTCCCCACTCATTCAATCACTCACCTCCCAACCCGACACCTCCCCTACCTTCTCCCTCCTCACGCGCCTCCGCCACGCCCCTCAATCCCACCCTCACATCGTTCCCATCGCACTCATGCTCCTCAGCTCCTACTTCCACAACCGGAACTGCAAGCACGCGCTCGCCGTGTTCCGCTGGTTACGCCGCCCGGACACGCCGTGCTCGCCGGGGGAGGAAGTGTATGCGGTTGTTATCGAAGGGTTCTGCAAGAATGGGTTCGTTTTGGAAGGGTTGGTGGCGATGAGGGCCATGATTGGTGATGATGAGAAGAAAAAGATGGTGCCGTGTTGCGGGTCGAGGGAGTGGGTTTATCGTGGGTTGTTGAGGGAAGCAAAGATTGAGGATGCGCTTGAGTTGAATGAAGCTCTTTTGGGATTTGAGAGTGGTGATGACAATGGGAGGGATAGGGTTTTGAAGGTGCTGGAACGTCTCATTGCTGAATGGGATCAGTAG 2655 0.4516 MSSSNGGKGDSDGDKHNKNKNKGKSSSSSSITSEQNSYLEEFFECCQHPEEIQEEELAKLLGLQREQVAKWFHDKRTQAQAQVAQSEPKFPILESSQEEVVPKPLERSPTPNVIPGEAEEFLKEKSRMLEIAKSGYEELNKLFQNESLWVKSSLDGRMVLDTEKYKQMFPRDTNPNVFKTSQTREESSKASTVVSTTLANKLFEALLSDPKGLGELFPTMVQRAEIIQEYEHGTNETKHGTLLLMYLETHHLSPLMIPRKYFFLRYCEHVHGSGTWVISDVSLDSLGGNLPHSPCWKFPSGCRIRHLPPDQNGRNTTLVEWIEHVEVNDIPQTNSLYRDVVANNIPFSAGRWIMFLLKNNEKLFHCQAIYNNEAVLIEGRGLLQISHRMVRSFCQILNMSGKPEITHFTQPPSNTNSKNSNNSYYGGEIKYSLHKNSAPGHPIGMIASLVTSFWVPLNFHEVFCFLTDATKRNQWDTLCTGHCAFEVANLQTGDYIGNRISVIRQDLPMIFNFTQPCGEHEKNEMIILQESSIDPVEAYIVYAPIARSNMHLLLNRNSGPVSSEIEVLSSGFALTGDANSVAGLMKRAGMPDYQQQFGTLLTMAYQIPVSSTPSTKMLKMKNLEVAHNIFRIMAVGTMRILQRLPSKPTISKLIYSPFSFSSSSSSIQPLSPSLTAEQLSMFNDLIPRLCHHSDHHDHLPTAIRLTATALLTNPSLHSLHLSPLIQSLTSQPDTSPTFSLLTRLRHAPQSHPHIVPIALMLLSSYFHNRNCKHALAVFRWLRRPDTPCSPGEEVYAVVIEGFCKNGFVLEGLVAMRAMIGDDEKKKMVPCCGSREWVYRGLLREAKIEDALELNEALLGFESGDDNGRDRVLKVLERLIAEWDQ* 885
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g1232 884 MobiDBLite consensus disorder prediction 1 35 - -
Aev04g1232 884 SUPERFAMILY Bet v1-like 441 606 - -
Aev04g1232 884 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HDG10-RELATED 19 616 - -
Aev04g1232 884 SUPERFAMILY Homeodomain-like 27 84 IPR009057 -
Aev04g1232 884 SMART HOX_1 24 86 IPR001356 GO:0003677
Aev04g1232 884 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 19 616 IPR042160 -
Aev04g1232 884 CDD homeodomain 31 78 IPR001356 GO:0003677
Aev04g1232 884 Gene3D Tetratricopeptide repeat domain 724 861 IPR011990 GO:0005515
Aev04g1232 884 ProSiteProfiles START domain profile. 121 365 IPR002913 GO:0008289
Aev04g1232 884 Pfam START domain 137 361 IPR002913 GO:0008289
Aev04g1232 884 Gene3D - 23 89 - -
Aev04g1232 884 SUPERFAMILY Bet v1-like 124 332 - -
Aev04g1232 884 Pfam Homeodomain 30 78 IPR001356 GO:0003677
Aev04g1232 884 Gene3D - 129 351 IPR023393 -
Aev04g1232 884 ProSiteProfiles 'Homeobox' domain profile. 22 82 IPR001356 GO:0003677
Aev04g1232 884 SMART START_1 129 362 IPR002913 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g1232 Aev-Chr4 7969238 7976440 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g1232 124 617 Homeobox Transcription Factor Family AT1G05230 33.267 2.69e-64 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Aev04g1232 START 8.1e-18 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g1232 K09338 - aprc:113852280 331.257