Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g1216 ATGGCATCATCCCAAGTTGAAATCGCTTCGTCTTCACCCTTTGGTTGCGTCTTGAGGGACCGTAATCATCGTGATGGAGGATGCAGAGAAAGCAAAGTTAAGGCGGCTCTTCAAAGAAACATCAAGAACTTCGTCATGGACCACATTAACACGTGTATGTCAATGTCCTCTGATTCAACCACAAACGAGAACGAAAACAACAATGCTGGTTCTTGGGTCTCAAATGCTTCCAATAACAGCAACAACAACAACAAAAGCCAAGAGAATCTTCGTCTCGCGAGGCTCAAGCATGCCAGCAATAAGGATGAATCTTCTCTGGCATCATTGATCAGCCCGAGACACTCGCGGCTCCTCGATCGGTGGGCTGCGAGACAAGCTCGAGCAATGGTGTCAACTTTGGAGGATGAAGTTGAGTTCTTGTCAATACATAACAGCAACAATAACAATAGCAATAGCAGCATGCTTAGAAGGTCAAATAGTTCTGCCTCAGATGAAACATCATCGGAGGTCTCGAACCTTGGTGCTTCTTCCCTTGTTCAGATATGGGAGAAGAGGCTCAACCAAGGCAATGGATCCAAACCAAGCACGCAGAATGGGAGGGTTAGTCCCAATTTTGCTGCTGCCACCAATAACTGTGACAATGCCCTGTCTTCTGAGGCAGGGGAATCCTGCTATCTCCCTGCTGCAGAGGAAAAGGACTCGTCGTTCGCTGATTGGGAATCGCATAGCGATCATTCCTTCTCGCCGCAAGGGAGGTGGTCGTCTTCTGAGGCTGCTGATGGTGACAGGGTTTGTGTGGCGGAGATCATCAAGAGGCTGACTTCTCCAAAGCCGGGTCAGAGCCCGTCGCCAATGCTTGGTGATGACAATTATTTGCTTATGAAGTTTGAGAGAGACCTACATGGGGAGCTCAACAACCTGGAAGAACGCAGAGCAGTATCCAAGTTCACACATAGTGGTCGAATTCAGTCATTGCTTCGACTGAAATTATTGCGTGCGAATGAGCAAGATGCTAATGATCAATGCAGCCAGCAATCAACATTATCTAGAGAGAACAAACAGCCACATGAATCTGCAATTATGCAACTAAGGGAAAGGTTTAGCACAGCAGTTGAACATAAAACTAGAGTCCAGACTGAAGCAACCAGTTCAAGAAGCTCTCGTACCGAGATAGTAACCAACACCGTACCGTTGGACGACTCTCCTGCTGCAAATCAACCCAAAAAAGATACTCAGAAACAGACTGTTCCTGGAACCACTATTACCACCACAGAATCCATACAAATATCAATGCCTCAGACTGAAGCCAATCACAATAAGGAAAAAGCTCATACAAGTTCACATGTGACAATCCAAGAAACATGTTTAGCTGTTCAACATGATAATTCTCAGGAAATTGCCAAGGCAACTCCATCCATGACTGATTCAGACGTAAATGAGACAGCAAATAAGGTAGAGACAAGCAAACAACAGTATGCTGTGATAGAAACCAATTGTGAAGAGACAGTAGAAGAGGAAGAGGCAAGAGACCAGCTCTATGGCGAAAAAAGCTATGATGATATGCTAGAAGAGGCCGTGGAGCAGTGTTATAATGAAATTAGTTATGATTGGATCAGCGAAATTTCCCGGCCTAGGAGCTACTGGGAAGAGCGCAGGCAAACATGGTATAGAGAGATGCTTGACACTGATTCTCAGAATGAGGATATAAGAACTCTCCTTGAAAGAAGAGCAGTTTCGACTTTCCTTACTAGTAACTTCCGGGAAACAATGGATAGATTGATGCACTCTCACAGGGGAACACAAACACAATTAGTCAATCTTCAAGATGATGATGAAGACAGCCAAGGGTTTATGGCAATTTTACAAGAACGGTTGCGTTCTGCAAGTACTCGTCAAGATGATGGAAGGGATAGAGTGGTCAAGGAAGAGTGTGATGAGAGGAGAAATGAGGAGGAGGAGGAGGAGAATTTAGAGCAGCAGGAGCAGGAGCTGTATGAAGCTGGTGACTATTGTCATCAATCCCCATCTACAAGATCATGGAGTGATAGAGACAATGAAGCCGGGGACGATATTGATAGAACTGCGTCTACAACGCCCTCACAACCTTCTCAGTCTCAGTCTTTTTGTCAGAATGATAGGCCATACTCTTCATCCACAAATCGCAATGCAATTGAAATAGAACTAGTCTATGATTTGAGAGGACAAATGGAGCAACTTTATCATGAGATGGCTGAGCTAAGGAAATCGATCAAGAGCTGTATGGAGATGCAGATGCAGATGCAACTACAGCAATCGATGAATCAAGACTTTCACACAGTTAAGAAAGAAGAAAAGAAGTCGCATAATAACCAGGCACCAAAGAAAGGCAACTGCTGCATCTGCTATGATATGAAAGTTGACTCAGTTTTATACAGGTGTGGCCACATGTGTGCGTGCATCAAGTGTGCCAATGAGCTGCAATGGAAGGGTGGAAAATGCCCGATTTGCCGAGCTAAGATAGTAGATGTTGTTCGAGTATTTGTCGATAATTAG 2532 0.4471 MASSQVEIASSSPFGCVLRDRNHRDGGCRESKVKAALQRNIKNFVMDHINTCMSMSSDSTTNENENNNAGSWVSNASNNSNNNNKSQENLRLARLKHASNKDESSLASLISPRHSRLLDRWAARQARAMVSTLEDEVEFLSIHNSNNNNSNSSMLRRSNSSASDETSSEVSNLGASSLVQIWEKRLNQGNGSKPSTQNGRVSPNFAAATNNCDNALSSEAGESCYLPAAEEKDSSFADWESHSDHSFSPQGRWSSSEAADGDRVCVAEIIKRLTSPKPGQSPSPMLGDDNYLLMKFERDLHGELNNLEERRAVSKFTHSGRIQSLLRLKLLRANEQDANDQCSQQSTLSRENKQPHESAIMQLRERFSTAVEHKTRVQTEATSSRSSRTEIVTNTVPLDDSPAANQPKKDTQKQTVPGTTITTTESIQISMPQTEANHNKEKAHTSSHVTIQETCLAVQHDNSQEIAKATPSMTDSDVNETANKVETSKQQYAVIETNCEETVEEEEARDQLYGEKSYDDMLEEAVEQCYNEISYDWISEISRPRSYWEERRQTWYREMLDTDSQNEDIRTLLERRAVSTFLTSNFRETMDRLMHSHRGTQTQLVNLQDDDEDSQGFMAILQERLRSASTRQDDGRDRVVKEECDERRNEEEEEENLEQQEQELYEAGDYCHQSPSTRSWSDRDNEAGDDIDRTASTTPSQPSQSQSFCQNDRPYSSSTNRNAIEIELVYDLRGQMEQLYHEMAELRKSIKSCMEMQMQMQLQQSMNQDFHTVKKEEKKSHNNQAPKKGNCCICYDMKVDSVLYRCGHMCACIKCANELQWKGGKCPICRAKIVDVVRVFVDN* 844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g1216 843 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 765 842 IPR013083 -
Aev04g1216 843 MobiDBLite consensus disorder prediction 236 259 - -
Aev04g1216 843 ProSiteProfiles Zinc finger RING-type profile. 791 830 IPR001841 -
Aev04g1216 843 MobiDBLite consensus disorder prediction 692 716 - -
Aev04g1216 843 MobiDBLite consensus disorder prediction 625 716 - -
Aev04g1216 843 MobiDBLite consensus disorder prediction 56 85 - -
Aev04g1216 843 Pfam Zinc finger, C3HC4 type (RING finger) 788 835 - -
Aev04g1216 843 Coils Coil 640 667 - -
Aev04g1216 843 Coils Coil 736 756 - -
Aev04g1216 843 MobiDBLite consensus disorder prediction 374 416 - -
Aev04g1216 843 PANTHER BNAC05G24000D PROTEIN 291 842 - -
Aev04g1216 843 MobiDBLite consensus disorder prediction 144 171 - -
Aev04g1216 843 MobiDBLite consensus disorder prediction 368 416 - -
Aev04g1216 843 CDD mRING-HC-C3HC5_NEU1 790 830 - -
Aev04g1216 843 MobiDBLite consensus disorder prediction 647 662 - -
Aev04g1216 843 PANTHER BNAC05G24000D PROTEIN 1 275 - -
Aev04g1216 843 PANTHER BNAC05G24000D PROTEIN 291 842 - -
Aev04g1216 843 PANTHER BNAC05G24000D PROTEIN 1 275 - -
Aev04g1216 843 SUPERFAMILY RING/U-box 768 835 - -
Aev04g1216 843 MobiDBLite consensus disorder prediction 627 646 - -
Aev04g1216 843 MobiDBLite consensus disorder prediction 241 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g1216 Aev-Chr4 7819757 7823970 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g1216 791 839 C3H Transcription Factor Family AT3G06140 38.776 3.39e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g1216 - - ahf:112741787 739.954