Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g1205 ATGTTACGCATTCTCAGCAGAATCGTTTCCCCAACAACGCCAAAGCTGCACTTTCTGCAAAACCAACCATGGCTTGCTGCGAAATTCGCTTCCACCACATCATCATCATCTTCAAGATCCAAAGGTAACTCTTTTGCAGTCTCATACCTCATTGACACTTGTGGGTTCCCACCAGAACGCGCTGCTTCGGTTTCCAAGTACCTCAATCTTAAAACCAGTGAAAAACCAGAGTTAGCGTTTGAGTTCTTCAAGAGCCTTGGTTTCTCACATTCACAGGTCTTATCTGTATTCAGAGGACGCCCTGAGCTACTACTAGCTAATCCTGAGAAATCACTAATGCTAAAAATTGAATATTTCAAGTCCTTAGGGTTTTCCAACTCTGATATTCTCAACATCATATTGCGTTTCCCTCATATCCTCGCTAGAAGTTTGAAGAATGAAATCATTCCCTCTTTCAATTTCTTAAACAACATGTTTCAGTCTAAGCACAAGCTCATGAAATCTGTTGTGCGCTATCCGGGTATTCTTTGTGACCTTGACACTGTTTTATTACCAAATATTAAACTTCTGAAAGAAGAAGGAGTTCCTGAATCACATATTGTTAAATTTATAGAATACTTTCCATATGTATTTTCGGAATGTACTAAGCAATTAGAGGAGAAAGTGCATGAAATTAAGAAATTAGGGTTTGATCCTGTGAAGATTTATTTTGTCGTGGCTATTAAAGCAAAGACACGAACAAGCATATCGACATGGGCTAGGAAGGAAGGTATTTATAGAAAATGGGGTTGGACTGATCAGGGTTTTTCTGCAGCTTTTAAAGCCTGTCCATGGTGTGTCATGATTTCAGACAAAAAGATTGAGGCGGTCATGGATTTTCTGGTGAACAAATTGGGCTACACATCTTCTGCTGTTGTCAGTTACCCAATAGTATTGACCATGAGCTTGGAAAAACGAATTATTCCAAGGGGCTCTGTTATTCCAGTATTAATGTCAAAGGGTCTGATTAGGCGGTTGAGCTTGAGTTCAGTATTTGGCCGTAATGAAAAGGCCTTCTTGGTCAAGTTTGTCTATTGTCATAAGGAAGAAGCTGATGAGCTATTGAAGTTGTATCATGCAAAAATGGCTCTTGCCAGTAGAATCATTTCTCCAACAGCACCAAAGCTGCACTTTCTCCGAAACCATCCATGGCTTTTCGTGAAATTCTTCAGCTCCATGACATCATCTTCAAGATCGAAAGGTAACACTTTCACAGTTTCATACCTCATCGACACTTGTGGGTTCCCACCGGAACGTGCTGCTTCGGTTTCCAAGTACCTCAATTTCGATACTAGTAAGAAACCGGAGTTAGTGATCGAGTTCTTCAAGTGCCATGGTTTATCGCAATCACAGATCTTATCTGTGATCAGCGGACACCCTCAGCTGTTACTAGCGGATCCTGAGAAATCTCTCAAGCCAAAAATCGATTTTTTCAAGTCTGTAGGGTTTCCTGACTCTGATATTCTCAACATTACATTGCGTTTCCCTCATATCCTCGCATTTGAGGAGAAAGTGAAGGAAGTTAAGGAATTAGGTTTAAGTTCTTTGAGGATGAATTTTGCATTGGCTATTCAGCATTTTAGAGTCCAACCTTTGTGTATGTCTACCTCGGAAAATAAGATTGATGCCATCATGGATTTTCTGGTGAACAAATTGGGCTACACATCTTCTGTTATTGTCAAGTACCCTGCAGTGTTGAACATGAGTTTGGAAAAGCGAAATATTCCGAGGGGTTCTGTTATTCTAGCTTTGCAGTCCAAGGGTCTGGTGGACGAGTTGAGCTTGCACACACTCATGCCAAGTGATAAGAGATGCGTGTTGGTTCTAGGCTTCAAGCCTTCAAGCCAGACTCATTGCATCACCATTCCGGCTTCCATCCGGCATGACAACTCTGTCGTCAAGCCGCCACCATACAGAGCGGTTGGCCGGCCATTGCAAACCCAAGCCACCATGGTGCCTTTCTTATTAAGTAGTGAAGCCAACAACCACTATGGCTCAAAGGTTGATGATCTGAGAATTGGGATTAGGAAACAAACCCAATTTAGCACCGTTTCTCCAACTACACGAAAACTTGTTTTCTCGCAGAACAAACCATGGCCATGGCTTCCTTTAAGATTCATTTCAATCACTTCTCCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCAGTAGCAAAAGATAACTCTTTCGTAGTTTCATACCTCACTGGCACTTGTGGGTTCTCCCCAGAACGCGCTATTACCATTTCCAAGCACTTGAATTTCAAAAATGGGGAAAAACCAGACTTGGTCATTAAGTTCTTTGAGAATCTTTGTTTCTCCAAAACGAAGGCAATGAGTGTCGTTCGGTCAGTCCCATTGCTCCTTCGAGCTAACCCTGATATAGCTTTTAAGCCAAAAATCGATTTTTTCAAATCCATAGGGTTTTCCAGTTCTGACATAAGCAGGATCATACACAATTGCCCCAATACCCTCACTAGAAGTTTGAATAGTGAAATCATTCCCGGTTTCGATTTCTTCAGCAATATGATTCAGTCTAAGCACAAGTTCATGAAAGCCATTATTCGCCATTCGGGTATTCTCTTTGACCTTGAGAAAGTTTCAGGACCCAATATCAAACTGATGAGAGAAGAAGGAATTCCTGAATCGCATATTGCTAGATTTGTAGAATACTATCCCGGATCGATGAAGTCATCTCATAAGCAATTCAAAGTAGCAATGCAGGCAGTTAAGGAATCAGGGTTTGATCCTTCAAGGTTGCAATTTGTTGTTGCTGTTCATGTAAAGTTATGCATGGGCAGATCCTGGGCGAGGAAGGAATCTATCTATAGGAAGTGGGGTTGGAGCGACAATGATATTTCTGCTGCATTTAAAACCTGTCCATGGTGCATTGCGGTTTCGGACAATAAGATCGAGGCTGTCATGGATTATCTAGTGAACAAATTGGGTTTTACATCTTCTGATATTGCTAAGACACCAGTAGTATTGACCATGAGCTTGGAAAAACGAATCATTCCGAGGGGTTCTGTTATTCTAGCCTTGATGTCAAGGGGTCTGGTGAAACGTTTGAGCTTGAGTGCAATATTTAAGGTTGATGAAGTGAGCTTCTTGAAAAAATATGTCCATAGTCATGCAAATGAAGCTGATGAGCTTTTGAGGTTTTATGAAGCTCCATTGACTCTTGTGCAGTGA 3249 0.4124 MLRILSRIVSPTTPKLHFLQNQPWLAAKFASTTSSSSSRSKGNSFAVSYLIDTCGFPPERAASVSKYLNLKTSEKPELAFEFFKSLGFSHSQVLSVFRGRPELLLANPEKSLMLKIEYFKSLGFSNSDILNIILRFPHILARSLKNEIIPSFNFLNNMFQSKHKLMKSVVRYPGILCDLDTVLLPNIKLLKEEGVPESHIVKFIEYFPYVFSECTKQLEEKVHEIKKLGFDPVKIYFVVAIKAKTRTSISTWARKEGIYRKWGWTDQGFSAAFKACPWCVMISDKKIEAVMDFLVNKLGYTSSAVVSYPIVLTMSLEKRIIPRGSVIPVLMSKGLIRRLSLSSVFGRNEKAFLVKFVYCHKEEADELLKLYHAKMALASRIISPTAPKLHFLRNHPWLFVKFFSSMTSSSRSKGNTFTVSYLIDTCGFPPERAASVSKYLNFDTSKKPELVIEFFKCHGLSQSQILSVISGHPQLLLADPEKSLKPKIDFFKSVGFPDSDILNITLRFPHILAFEEKVKEVKELGLSSLRMNFALAIQHFRVQPLCMSTSENKIDAIMDFLVNKLGYTSSVIVKYPAVLNMSLEKRNIPRGSVILALQSKGLVDELSLHTLMPSDKRCVLVLGFKPSSQTHCITIPASIRHDNSVVKPPPYRAVGRPLQTQATMVPFLLSSEANNHYGSKVDDLRIGIRKQTQFSTVSPTTRKLVFSQNKPWPWLPLRFISITSPSSSSSSSSSSSSSSSSSVAKDNSFVVSYLTGTCGFSPERAITISKHLNFKNGEKPDLVIKFFENLCFSKTKAMSVVRSVPLLLRANPDIAFKPKIDFFKSIGFSSSDISRIIHNCPNTLTRSLNSEIIPGFDFFSNMIQSKHKFMKAIIRHSGILFDLEKVSGPNIKLMREEGIPESHIARFVEYYPGSMKSSHKQFKVAMQAVKESGFDPSRLQFVVAVHVKLCMGRSWARKESIYRKWGWSDNDISAAFKTCPWCIAVSDNKIEAVMDYLVNKLGFTSSDIAKTPVVLTMSLEKRIIPRGSVILALMSRGLVKRLSLSAIFKVDEVSFLKKYVHSHANEADELLRFYEAPLTLVQ* 1083
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g1205 1082 Pfam mTERF 879 1055 IPR003690 GO:0003690|GO:0006355
Aev04g1205 1082 Pfam mTERF 185 353 IPR003690 GO:0003690|GO:0006355
Aev04g1205 1082 Pfam mTERF 452 516 IPR003690 GO:0003690|GO:0006355
Aev04g1205 1082 Pfam mTERF 81 234 IPR003690 GO:0003690|GO:0006355
Aev04g1205 1082 Pfam mTERF 784 939 IPR003690 GO:0003690|GO:0006355
Aev04g1205 1082 Pfam mTERF 517 612 IPR003690 GO:0003690|GO:0006355
Aev04g1205 1082 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN, PUTATIVE ISOFORM 1-RELATED 539 614 - -
Aev04g1205 1082 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN, PUTATIVE ISOFORM 1-RELATED 732 1076 - -
Aev04g1205 1082 PANTHER CGI-12 PROTEIN-RELATED 539 614 IPR003690 GO:0003690|GO:0006355
Aev04g1205 1082 PANTHER CGI-12 PROTEIN-RELATED 732 1076 IPR003690 GO:0003690|GO:0006355
Aev04g1205 1082 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN, PUTATIVE ISOFORM 1-RELATED 35 378 - -
Aev04g1205 1082 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN, PUTATIVE ISOFORM 1-RELATED 410 513 - -
Aev04g1205 1082 SMART mt_12 502 527 IPR003690 GO:0003690|GO:0006355
Aev04g1205 1082 SMART mt_12 270 301 IPR003690 GO:0003690|GO:0006355
Aev04g1205 1082 SMART mt_12 569 603 IPR003690 GO:0003690|GO:0006355
Aev04g1205 1082 SMART mt_12 389 429 IPR003690 GO:0003690|GO:0006355
Aev04g1205 1082 SMART mt_12 466 497 IPR003690 GO:0003690|GO:0006355
Aev04g1205 1082 SMART mt_12 94 125 IPR003690 GO:0003690|GO:0006355
Aev04g1205 1082 SMART mt_12 1005 1039 IPR003690 GO:0003690|GO:0006355
Aev04g1205 1082 SMART mt_12 302 336 IPR003690 GO:0003690|GO:0006355
Aev04g1205 1082 SMART mt_12 798 829 IPR003690 GO:0003690|GO:0006355
Aev04g1205 1082 SMART mt_12 973 1004 IPR003690 GO:0003690|GO:0006355
Aev04g1205 1082 SMART mt_12 166 196 IPR003690 GO:0003690|GO:0006355
Aev04g1205 1082 SMART mt_12 905 935 IPR003690 GO:0003690|GO:0006355
Aev04g1205 1082 SMART mt_12 537 568 IPR003690 GO:0003690|GO:0006355
Aev04g1205 1082 SMART mt_12 201 231 IPR003690 GO:0003690|GO:0006355
Aev04g1205 1082 SMART mt_12 834 865 IPR003690 GO:0003690|GO:0006355
Aev04g1205 1082 SMART mt_12 130 161 IPR003690 GO:0003690|GO:0006355
Aev04g1205 1082 Gene3D Transcription termination factor 3, mitochondrial 428 618 IPR038538 -
Aev04g1205 1082 Gene3D Transcription termination factor 3, mitochondrial 761 883 IPR038538 -
Aev04g1205 1082 Gene3D Transcription termination factor 3, mitochondrial 165 370 IPR038538 -
Aev04g1205 1082 Gene3D Transcription termination factor 3, mitochondrial 884 1073 IPR038538 -
Aev04g1205 1082 PANTHER CGI-12 PROTEIN-RELATED 410 513 IPR003690 GO:0003690|GO:0006355
Aev04g1205 1082 PANTHER CGI-12 PROTEIN-RELATED 35 378 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g1205 Aev-Chr4 7732853 7739620 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Aev04g1205 mTERF 2.8e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g1205 K15032 - qsu:111987836 304.679