Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g1204 ATGTTGCGCATTCTCAGCAGAATCGTTTCTCCAACAACACCGAAGTTGCACTTCCTGCAAAACCAACCATGGCTTGCTGCGAAATTCGCTTCCACCACATCATCATCATCTTCAGGATCAAAAGGTAACTCTTTTGCAGTCTCTTACCTCATCGACACTTGTGGGTTCACACCAGAACGCGCTGCTTCTGTTTCCCAGTACTTCAATTTTAAAACTAGTGAAAAACCAGAGTTAGCATTTGAGTTTTTCAAGAGCCTTGGTTTCTCACAATCACAGGCTTTATCAGTATTCAGAGGACGCCCTGGGCTACTACTAGCTAATCCTGAGAAATCATTAATGCCAAAAATTGAATATTTCAAGTCCTTAGGGTTTTCTGACTCTGACATTCGCCGCATCATAATGCGTCGCCCTCACATCCTCGCTAGAAGTTTGAACACTGAAATTATTCCTACTTTTGATACTTTCGATAACTTATTTCAGTCTAAGCCCAAGCTCATGAAAACTATTATACGATTTCCGGATATTCTATGTGACTTCGACAAGATTACATCATGTAATATGAAACTACTGAGAGATGGAGGAGTTTCTGAATCACTTATTCTTAGATTTATAGAATACTATCCCCGCACGTTGAAGGTGCATCCTAAGAAATTTAAGGAGGTGTTGCAGGAACTTGAGGAACTTGGATTCAATCCTCAAAGGATACAATTTATTGTGGCTATCCATGTGAAGATATGCATAGTCAGATCTGCACAGGAGAGGAAGGAAGGTATTTATAAAAAGTGGGGTTGGGCTGATCATGATTTTTCTGCAGCATTTAGAGCGTATCCGTGGTATATTGTGACTTCAGACAATAAGATTGAGGCAATCATGGATTTTTTGGTGAACAAAATGGGTTTCACGTCTTCTGCTATTGCCAAGTTTCCAGCAGTATTGACCATGAGCTTGGAGAAGAGAATTATTCCGAGGGGTTCTGTTATTCTAGTTTTGATGTCTAAGGGTATGATAAAGCGGTTGAGCTTGAGTTCAATATTTAACTGTAATGAAGAACTCTTCTTGAATAAGTTTGTCTCTCGTCATGAGCATGAACTAGATGATCTATTGAAGTTGTACCATGCTAAAATGGCTCTTGCTAGGTGA 1140 0.3982 MLRILSRIVSPTTPKLHFLQNQPWLAAKFASTTSSSSSGSKGNSFAVSYLIDTCGFTPERAASVSQYFNFKTSEKPELAFEFFKSLGFSQSQALSVFRGRPGLLLANPEKSLMPKIEYFKSLGFSDSDIRRIIMRRPHILARSLNTEIIPTFDTFDNLFQSKPKLMKTIIRFPDILCDFDKITSCNMKLLRDGGVSESLILRFIEYYPRTLKVHPKKFKEVLQELEELGFNPQRIQFIVAIHVKICIVRSAQERKEGIYKKWGWADHDFSAAFRAYPWYIVTSDNKIEAIMDFLVNKMGFTSSAIAKFPAVLTMSLEKRIIPRGSVILVLMSKGMIKRLSLSSIFNCNEELFLNKFVSRHEHELDDLLKLYHAKMALAR* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g1204 379 Pfam mTERF 260 353 IPR003690 GO:0003690|GO:0006355
Aev04g1204 379 Pfam mTERF 81 238 IPR003690 GO:0003690|GO:0006355
Aev04g1204 379 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN, PUTATIVE ISOFORM 1-RELATED 35 376 - -
Aev04g1204 379 PANTHER CGI-12 PROTEIN-RELATED 35 376 IPR003690 GO:0003690|GO:0006355
Aev04g1204 379 SMART mt_12 201 231 IPR003690 GO:0003690|GO:0006355
Aev04g1204 379 SMART mt_12 94 125 IPR003690 GO:0003690|GO:0006355
Aev04g1204 379 SMART mt_12 130 161 IPR003690 GO:0003690|GO:0006355
Aev04g1204 379 SMART mt_12 270 301 IPR003690 GO:0003690|GO:0006355
Aev04g1204 379 SMART mt_12 302 336 IPR003690 GO:0003690|GO:0006355
Aev04g1204 379 Gene3D Transcription termination factor 3, mitochondrial 177 370 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g1204 Aev-Chr4 7729794 7730933 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Aev04g1204 mTERF 3.9e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g1204 K15032 - qsu:112020607 297.745