Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g1203 ATGTTACGCATTCTCAGCAGAATCGTTTCTCCAACAACACCAAAGCTGCTCTTTCTGCAAAACCAACCATGGCTTGCTGCGAAATTCGCTTCAACCACATCAACATCTTCAAGATCAAAAGGTAACACTTTTGCAGTCTCATACCTCATTGACACTTGTGGGTTCTCACCTGAACGCGCTGCTTCAGTTTCCAAGTTCCTCAATTTTAAAACTAGTGAAAAACCAGAGTTAGCGTTTGAGTTCTTCAAGATCCATGGTTTCTCTAAATCACAGGCCTTAACTGTCATCAGTGGACACCCTAAGCTACTACTAGCTGATCCTGAGAAATCATTAATGCCGAAAATTGAATATTTCAAGTCCTTAGGGTTTTCTAACTCTGACATTTGCCACATCATAGTGCGTCACCCTCGCATCCTCGCTAGAAGTTTGAAGAATGAAATTATTCCCTCTTTTGATTTCTTCAACAACTTATTTCAGTCTAAGCCCAAGCTCATGAAAACTATTATGCGATGTCCGGATATCCTCTGTGACTTTGACAGGATTACAGCATGCAATATGAAATTTCTGAGAGAACGTGGAGTTCCTGAATCTAATATTGTTAGATTTATTGAATACTACCCCAACACATTTAAGACGATTACTAAGAAATTTAAGATGGTATCGCAGGAACTTGAAGAATTTGGATTCAATCCTCAAAGGATGCAATTTGTTGTGGCTACCCATGTGAAGATATGGATAGACAGATCCACGCAGGAGAGGAAGGAAGGTATTTATAAAAAGTGGGGTTGGGCTGATCATGACTTTTCTGCTGCATTTAGAGCCTTTCCGTGGTGTATTGTGACTTCAGACAATAAGATTGAGGCGATCATGGATTTTTTGGTGAACAAAATGGGTTACAAGTCTTCTGCTATTGTCAAGTGTCCAGCAGTATTGGGCATGAGCTTGGAGAAGAGAATTATTCCAAGGGGTTCTGTTATTGTAGTTTTGATGTCAAAGGGCCTGATGAAGAGACGGAGCTTGAGTTCATTATTTAACTGTAATGAAAAGGTGTTCTTGGATAAGTTTGTCTCTTGTCATGAGAATGAAGCAGATGATCTATTGAAGCTGTACCATGCTAAGATTGCTCTTGCTAGGTGA 1137 0.3993 MLRILSRIVSPTTPKLLFLQNQPWLAAKFASTTSTSSRSKGNTFAVSYLIDTCGFSPERAASVSKFLNFKTSEKPELAFEFFKIHGFSKSQALTVISGHPKLLLADPEKSLMPKIEYFKSLGFSNSDICHIIVRHPRILARSLKNEIIPSFDFFNNLFQSKPKLMKTIMRCPDILCDFDRITACNMKFLRERGVPESNIVRFIEYYPNTFKTITKKFKMVSQELEEFGFNPQRMQFVVATHVKIWIDRSTQERKEGIYKKWGWADHDFSAAFRAFPWCIVTSDNKIEAIMDFLVNKMGYKSSAIVKCPAVLGMSLEKRIIPRGSVIVVLMSKGLMKRRSLSSLFNCNEKVFLDKFVSCHENEADDLLKLYHAKIALAR* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g1203 378 Gene3D Transcription termination factor 3, mitochondrial 56 180 IPR038538 -
Aev04g1203 378 Gene3D Transcription termination factor 3, mitochondrial 181 369 IPR038538 -
Aev04g1203 378 SMART mt_12 301 335 IPR003690 GO:0003690|GO:0006355
Aev04g1203 378 SMART mt_12 200 230 IPR003690 GO:0003690|GO:0006355
Aev04g1203 378 SMART mt_12 93 124 IPR003690 GO:0003690|GO:0006355
Aev04g1203 378 SMART mt_12 129 160 IPR003690 GO:0003690|GO:0006355
Aev04g1203 378 SMART mt_12 269 300 IPR003690 GO:0003690|GO:0006355
Aev04g1203 378 SMART mt_12 165 195 IPR003690 GO:0003690|GO:0006355
Aev04g1203 378 Pfam mTERF 186 352 IPR003690 GO:0003690|GO:0006355
Aev04g1203 378 Pfam mTERF 146 241 IPR003690 GO:0003690|GO:0006355
Aev04g1203 378 Pfam mTERF 80 203 IPR003690 GO:0003690|GO:0006355
Aev04g1203 378 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN, PUTATIVE ISOFORM 1-RELATED 36 375 - -
Aev04g1203 378 PANTHER CGI-12 PROTEIN-RELATED 36 375 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g1203 Aev-Chr4 7723266 7724402 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Aev04g1203 mTERF 5.7e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g1203 K15032 - qsu:112020620 311.612