Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g1202 ATGTTTCACATTCTCAGCAGAATCGTTTCTCCAACAACACCAAAGCTGCATTTTCTCCGAAACCATCCATGGCTTTATGTGAAATTCTTCAGCTCAAACACATCGTCGTCTTCAAGATCAAAAGGTAACTCTTTTGTAGTCTCTTACCTCATTGGCACTTGTGGGTTCCCACCAGAACGCGCTGCTTCGGTTTCCAAGTACCTCAGTTTTAAAACTAGTGAAAAACCAGAGTTAGTGTTTGAGTTCTTCAAGAGCCTTGGTTTCTCACATCCACAGGTCTTATCTTTGATCAGTTATCAGCCTAAACTACTACTTGCTAATCCCGAGAAATCATTAATGCCGAAAATTGAATATTTCAAGTCCCTAGGGTTTTCTGACTCTGACATTTGCCGCATCATAATGCGTCGCCCTCACATCCTCGCTAGAAGTTTGAACACTGAAATAATTCCTACTTTTGATATTTTCAATAACTTATTTCAGTCTAAGCCCAAGCTCATGAAAACTATTATGGGATTTCCGGATATTCTATGTGACTTCGACAAGATTACATTATGTAATATGAAACTACTGAGAGATGGAGGAGTTCCTGAATCACTTATTCTTAGATTTATAGAGTACTATCCCCGCACGTTGAAGGCGCATCCTAAGAAATTTAAGGAGGTGTTGCAGGAACTTGAGGAACTTCAATTCAATCATCAAAGGATACAATTTGTTGTGGCTATCCATGTGAAGATATGCATAGTCAGATCCACGCAGGAGAGGAAGGAAGGTATTTATAAAAAGTGGGGTTGGGCTGATCATGATATTTCTGCAGCATTTAGAGCCTATCCGTGGTGTATTGTGACTTCAGACAATAAGATTGAGGCGATCATGGATTTTTTGGTGAACAAAATGGGTTACACGTCTTCTGCTATTGCCAAGTTTCCTGCAGTATTGGCCATGAGCTTGGAGAAGAGAATTATTCCGAGGGGTTCTGTTATTCTACTTTTGATGTCAAAGAGTCTGATGAAGCAGTGCAGGTTGAGCACAGCATTTAAATCTAATGAAAAGGTGTTCTTGGATAAGTTTGTCTCTTGTCATGAAAATGAAGCAGATGATCTATTGAAGCTGTACCGTGCTAAAATTGCTCTTGCTAGGTGA 1140 0.3982 MFHILSRIVSPTTPKLHFLRNHPWLYVKFFSSNTSSSSRSKGNSFVVSYLIGTCGFPPERAASVSKYLSFKTSEKPELVFEFFKSLGFSHPQVLSLISYQPKLLLANPEKSLMPKIEYFKSLGFSDSDICRIIMRRPHILARSLNTEIIPTFDIFNNLFQSKPKLMKTIMGFPDILCDFDKITLCNMKLLRDGGVPESLILRFIEYYPRTLKAHPKKFKEVLQELEELQFNHQRIQFVVAIHVKICIVRSTQERKEGIYKKWGWADHDISAAFRAYPWCIVTSDNKIEAIMDFLVNKMGYTSSAIAKFPAVLAMSLEKRIIPRGSVILLLMSKSLMKQCRLSTAFKSNEKVFLDKFVSCHENEADDLLKLYRAKIALAR* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g1202 379 SMART mt_12 16 57 IPR003690 GO:0003690|GO:0006355
Aev04g1202 379 SMART mt_12 61 89 IPR003690 GO:0003690|GO:0006355
Aev04g1202 379 SMART mt_12 270 301 IPR003690 GO:0003690|GO:0006355
Aev04g1202 379 SMART mt_12 201 231 IPR003690 GO:0003690|GO:0006355
Aev04g1202 379 SMART mt_12 94 125 IPR003690 GO:0003690|GO:0006355
Aev04g1202 379 SMART mt_12 302 336 IPR003690 GO:0003690|GO:0006355
Aev04g1202 379 SMART mt_12 130 161 IPR003690 GO:0003690|GO:0006355
Aev04g1202 379 Pfam mTERF 207 353 IPR003690 GO:0003690|GO:0006355
Aev04g1202 379 Pfam mTERF 81 238 IPR003690 GO:0003690|GO:0006355
Aev04g1202 379 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN, PUTATIVE ISOFORM 1-RELATED 34 376 - -
Aev04g1202 379 PANTHER CGI-12 PROTEIN-RELATED 34 376 IPR003690 GO:0003690|GO:0006355
Aev04g1202 379 Gene3D Transcription termination factor 3, mitochondrial 182 370 IPR038538 -
Aev04g1202 379 Gene3D Transcription termination factor 3, mitochondrial 58 181 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g1202 Aev-Chr4 7719751 7720890 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Aev04g1202 mTERF 2.7e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g1202 K15032 - twl:120002213 301.212