Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g1201 ATGCTTCACATTCTCAGTCAAATCGTTTCTCCAACATCACCGAAGCTGCACTTTCTCAGAAACCATCCATGGATTTATGTGAAATTCTTCAGCTCCAACACATCGTCTTCAAGATCAAAAGGTAACTCTTTTGCAGTCTCTTACCTCATTGGCACTTGTGGGTTCCCACCAGAACGCGCTGCTTCGGTTTCCAAGCACCTCAGTTTTAAAACTAGTGAAAAACCAGAGTTAGCGTTTGAGTTCTTCAAGAGCCTTGGTTGCTCACATTCACAGGTCTTATCTGTGATCAGGTCACAGCCTCAGCTACTACTAGCTGATCCTGAGAAATCATTAATGCCAAAAATTGAATATTTCAAGTTCTTAGGGTTTTCTGACGCTGACATTCGCCGCATCATAGTGCGTGGCCCTCACGTCCTCATTAGAAGTTTGAAGAATGAAATTATTCCCACTTTTGATATTGTCAATAACTTATTACAGCCTAAGTCCAAGCTCATGAAAACTATTATGCGATGTCCGCAAATCCTCTATGACTTTGACAGGAGTACATCATGCAATATGAAACTTCTGAGAGAACGAGGAGTTCCTGAATCAAATATTTTTAGATTTATAGAATACTTCCCCGCCACATTTAAGGTGCATCCTAAGAGATTCGAGGAGGCGTTGCAGGAACTTGAGAAATTTGGATTCAATCCTCAAAGGATACAATTTGTTGTGGCTATACATGTGAAGACATGGATAGACAGATCCACGCAGGAGAGGAAGGAAGGTATTTATAAAAAGTGGGGTTGGGCTGATCATGATTTTTCTGCAGCATTTAGAGCCTCTCCGTGGTGTATTGTGACTTCAGACAATAAGATTGAGGCGATCATGGATTTTTTGGTGAACAAAATGGGTTACACGTCTTCTGCTATTGCCAAGTGTCCCGCAGTATTGAGCATGAGCTTGGAGAAGAGAATTATTCCGAGGGGTTCTGTTATTCTACTTTTGATGTCAAAGAGTCTGATGAAGCAGTGCAGGTTGAGCACAGCATTTAAATCTAATGAAAAGGTGTTCTTGGATAAGTTTGTCTCTTGTCATGAAAATGAAGCAGATGATCTATTGAAGCTGTACCGTGCTAAAATTGCTCTTGCTAGGTGA 1137 0.4107 MLHILSQIVSPTSPKLHFLRNHPWIYVKFFSSNTSSSRSKGNSFAVSYLIGTCGFPPERAASVSKHLSFKTSEKPELAFEFFKSLGCSHSQVLSVIRSQPQLLLADPEKSLMPKIEYFKFLGFSDADIRRIIVRGPHVLIRSLKNEIIPTFDIVNNLLQPKSKLMKTIMRCPQILYDFDRSTSCNMKLLRERGVPESNIFRFIEYFPATFKVHPKRFEEALQELEKFGFNPQRIQFVVAIHVKTWIDRSTQERKEGIYKKWGWADHDFSAAFRASPWCIVTSDNKIEAIMDFLVNKMGYTSSAIAKCPAVLSMSLEKRIIPRGSVILLLMSKSLMKQCRLSTAFKSNEKVFLDKFVSCHENEADDLLKLYRAKIALAR* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g1201 378 Pfam mTERF 80 236 IPR003690 GO:0003690|GO:0006355
Aev04g1201 378 Pfam mTERF 160 352 IPR003690 GO:0003690|GO:0006355
Aev04g1201 378 SMART mt_12 269 300 IPR003690 GO:0003690|GO:0006355
Aev04g1201 378 SMART mt_12 165 195 IPR003690 GO:0003690|GO:0006355
Aev04g1201 378 SMART mt_12 93 124 IPR003690 GO:0003690|GO:0006355
Aev04g1201 378 SMART mt_12 129 160 IPR003690 GO:0003690|GO:0006355
Aev04g1201 378 SMART mt_12 301 335 IPR003690 GO:0003690|GO:0006355
Aev04g1201 378 SMART mt_12 200 230 IPR003690 GO:0003690|GO:0006355
Aev04g1201 378 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN, PUTATIVE ISOFORM 1-RELATED 36 375 - -
Aev04g1201 378 PANTHER CGI-12 PROTEIN-RELATED 36 375 IPR003690 GO:0003690|GO:0006355
Aev04g1201 378 Gene3D Transcription termination factor 3, mitochondrial 179 369 IPR038538 -
Aev04g1201 378 Gene3D Transcription termination factor 3, mitochondrial 56 178 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g1201 Aev-Chr4 7715509 7716645 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Aev04g1201 mTERF 2.8e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g1201 K15032 - vvi:100240766 305.449