Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g1196 ATGTTTAATTCCCACCTTTACCAACAACCCCTTCTCTTCCTAAAGCTTAGAGCTATTGTCACTGTCCCATTCCATAACCCATCACCATTTCTTCCATATTCTCTCAATTTCTGCACTAAAACAGCTTCAGAATCAAACCCTTTTGTTGTGTCTTACCTCATCGACAACCTCGGGTTTTCCCCAAAATCTGCCCTTCAAGCCTCAAAACGACTTCGTTTTAAGACCCCAGAAAAGCCTGATTCGGTTATCGCCTTCTTCAAGAGCCATGGATTCTCACCTTCCCAGACGAATAGCACTCTTATGAAATCACCACAGTTACTTATGAGCAACACCGAAAAGTTGTTGCAAAAGTTCGAATTTTTAGCCTCCAAAGGTGCTTCAGCCTCTGATATTATCAATATAGTTACTAGGAACCCCATTTTCGCGAAATCGAGCCTCAAGAACAGCATAATTCCTATTTATGAAATTGTTAGAGGCTTCTCTCAATCTGATAAAGCAGCCATTCGTTGCCTGGTCGGTTGTCCCTTTGTGTTCAATGGGGCTCGCTTCATACAAAATGTGAAGCTGTTGCTTGATGAAGGAGTCACTCCCTCCATCATTCAATACATTTTTCGCTCTAGAGCTACGACGCTCGCCTCTTCTGGCTTGAAGAAGGTTGTGGATGAAGTAAGGGAATTGGGGTTTGAGCCTTCCCAAGTGAAATTCGGTATAGCATTGGTAGCCAAATGCACTCTTACCAAGTCTCTCTATGATGCCAAAGTTGATGCTTTGAAGAGCTGGGGGTGGTCTGAAGAAGCGATATCTGAAGCATTCCAGAGGCAGCCATGGTATATTTTAGCTTCTAAGGATAAGATTAACAAGGTGATGAGTGTTTGGGTCAATCAGTTAGGTTGGGACCCTTTGGCCCCTGTCAAGCTTCCAGAGATTTTTGGGTTCAGTTTGGAGAAAAGGATCATTCCGAGGGCGTTTGTTATCCGATATTTACTCGAAAGAGGATTGAGAGACAAGAGCCTCAGCTTGTGTACACCACTTTGTAGGTCTGAAAAGGTGTTCCTCCGAAGGTATGTGGAGTCTTTTCCTGAGGAAAGGTCTCAACTACTGAAGATATACAAGGAAAAAATGAATGTTCAAGACCAAGATAACAGGGAATGA 1152 0.4314 MFNSHLYQQPLLFLKLRAIVTVPFHNPSPFLPYSLNFCTKTASESNPFVVSYLIDNLGFSPKSALQASKRLRFKTPEKPDSVIAFFKSHGFSPSQTNSTLMKSPQLLMSNTEKLLQKFEFLASKGASASDIINIVTRNPIFAKSSLKNSIIPIYEIVRGFSQSDKAAIRCLVGCPFVFNGARFIQNVKLLLDEGVTPSIIQYIFRSRATTLASSGLKKVVDEVRELGFEPSQVKFGIALVAKCTLTKSLYDAKVDALKSWGWSEEAISEAFQRQPWYILASKDKINKVMSVWVNQLGWDPLAPVKLPEIFGFSLEKRIIPRAFVIRYLLERGLRDKSLSLCTPLCRSEKVFLRRYVESFPEERSQLLKIYKEKMNVQDQDNRE* 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g1196 383 Gene3D Transcription termination factor 3, mitochondrial 182 369 IPR038538 -
Aev04g1196 383 SMART mt_12 268 299 IPR003690 GO:0003690|GO:0006355
Aev04g1196 383 SMART mt_12 132 163 IPR003690 GO:0003690|GO:0006355
Aev04g1196 383 SMART mt_12 201 229 IPR003690 GO:0003690|GO:0006355
Aev04g1196 383 SMART mt_12 300 334 IPR003690 GO:0003690|GO:0006355
Aev04g1196 383 SMART mt_12 97 127 IPR003690 GO:0003690|GO:0006355
Aev04g1196 383 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 34 376 - -
Aev04g1196 383 PANTHER CGI-12 PROTEIN-RELATED 34 376 IPR003690 GO:0003690|GO:0006355
Aev04g1196 383 Pfam mTERF 84 230 IPR003690 GO:0003690|GO:0006355
Aev04g1196 383 Pfam mTERF 183 351 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g1196 Aev-Chr4 7665882 7667033 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Aev04g1196 mTERF 1.6e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g1196 K15032 - gmx:102666739 362.844
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g2959 01 31390620 31391771 Aev04g1196 04 7665882 7667033 PCT