Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g1193 ATGAATGGAGGCAGTTCTTGTTCCTCTAATGACAATGGCGTCATCAAGGAACAAGACCGGTTGCTTCCAATAGCAAATGTGGGTCGCATTATGAAGCAGATTCTGCCTCAGAATGCGAAAATCTCGAAGGAATCGAAGGAGACAATGCAGGAGTGCGTGTCGGAGTTTATAAGCTTTGTGACGAGTGAGGCATCAGAGAAGTGCAGGAAGGAGAGGAGGAAGACTGTGAATGGTGATGATGTATGCTGGGCACTAGCAACACTTGGTTTTGATGATTATGCTGAGACTATGAGAAGGTACTTGCATAGATACAGAGAATTAGATGTAGATAATAAGGCTAATAGTAGTATTAGTAATCAAGATAAGGAAATTAATATATAA 381 0.4121 MNGGSSCSSNDNGVIKEQDRLLPIANVGRIMKQILPQNAKISKESKETMQECVSEFISFVTSEASEKCRKERRKTVNGDDVCWALATLGFDDYAETMRRYLHRYRELDVDNKANSSISNQDKEINI* 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g1193 126 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 21 85 IPR003958 -
Aev04g1193 126 ProSitePatterns NF-YB/HAP3 subunit signature. 52 68 IPR003956 GO:0005634|GO:0006355|GO:0043565
Aev04g1193 126 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-5 7 120 - -
Aev04g1193 126 PRINTS CCAAT-binding transcription factor subunit A signature 87 105 - -
Aev04g1193 126 PRINTS CCAAT-binding transcription factor subunit A signature 49 67 - -
Aev04g1193 126 PRINTS CCAAT-binding transcription factor subunit A signature 68 86 - -
Aev04g1193 126 SUPERFAMILY Histone-fold 18 112 IPR009072 GO:0046982
Aev04g1193 126 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 7 120 IPR027113 GO:0001228|GO:0006355|GO:0016602
Aev04g1193 126 Gene3D Histone, subunit A 10 125 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g1193 Aev-Chr4 7651646 7652026 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g1193 14 108 CCAAT-HAP3 Transcription Factor Family AT2G47810 78.947 5.38e-57 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Aev04g1193 CBFD_NFYB_HMF 8.4e-27 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g1193 K08065 - gmx:100794513 195.667