Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g1184 ATGCAGAACGAAGAGGGACAGCTCACCGAGCTCTACATTCCTAGGAAGTGCTCCGCAACCAACAGATTGATTACTGCAAAGGACCATGCCTCAGTGCAGATCAACATCGGGCATTTGGATGAGACCGGCGTCTACCATGGCCAGTTCTCCACATTCGCCCTCTGTGGCTTCATTCGCGCACAGGGTGATGCTGATAGTGCACTAGATCGCTTGTGGCAGAAGAAGAAAGTTGAAACCAAGCAGCAGTAG 249 0.5181 MQNEEGQLTELYIPRKCSATNRLITAKDHASVQINIGHLDETGVYHGQFSTFALCGFIRAQGDADSALDRLWQKKKVETKQQ* 83
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g1184 82 ProSitePatterns Ribosomal protein S21e signature. 11 19 IPR018279 GO:0003735|GO:0005840|GO:0006412
Aev04g1184 82 Pfam Ribosomal protein S21e 1 77 IPR001931 GO:0003735|GO:0005840|GO:0006412
Aev04g1184 82 Gene3D - 1 82 IPR038579 -
Aev04g1184 82 PANTHER 40S RIBOSOMAL PROTEIN S21 1 82 - -
Aev04g1184 82 PIRSF RPS21e 1 82 IPR001931 GO:0003735|GO:0005840|GO:0006412
Aev04g1184 82 PANTHER 40S RIBOSOMAL PROTEIN S21 1 82 IPR001931 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g1184 Aev-Chr4 7560191 7561235 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g1184 1 81 Cytoplasmic Ribosomal Protein Gene Family AT5G27700 85.185 1.94e-51 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g1184 K02971 - gmx:100817753 159.844
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g2944 01 31328317 31329315 Aev04g1184 04 7560191 7561235 PCT