LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aev04g1179	ATGGACCCTCGATCCTACCCTGTCTCGGGACCCCAATTGAAGATGACGATTCCACCCTCCGACAACGACCGCGCCGCCGCGCCGGAGCTGCGCGCTCTCGATTGCAACAACCTCAGCTCCCTCTGTGACCACATCCAATCCGAAGGCTTCAATTCCGGCTCCTTCTCCGACATCCTCGTCCACGCCCTCGGCTCCACCTTCCGCCTCCACCGCCTCCTCCTCTCCCGCAGTTCTTATTTCAGGAACATGCTTCAAGGGCCTTGGAAAGAAGCATCTGCTCCTGTTGTGACACTCCATGTGGATGACAAGAATGTTAATGAAGAGGCAATTACTATGGCATTGGCTTATCTGTATGGCCACCACCCTAAGCTTAATGACAACAATGCATTTCGTGTTCTTGCTGCCGCTTCCTTTCTTGACCTCCAGGATTTGTGTGCAATATGTACGGACTTCATTATATCTGAGCTTTGGACTTCTAACTTCTTAGCTTATCAGGTGTTTGCGGAGAACCAAGACTATGGCATTCATGGGGAGCGCGTTAGGAATGCTTGTTGGGGCTACCTCTGCCAAAGTGGTGGCATGGAATTGAAAGAGGTGCTACCTAAACTTTCATCTCAAACATTGCATGCATTACTTACCAATGATGAACTTTGGGTGCCAAGCGAGGAGAAAAGGTTTGAATTGGCATTGTATGCTTTCCTGGCAAAATGTGCTCAGTGGAAGACCAAACATCCTGAACAAGGAAGTTCTGGTTCTGAGTCTGGAAGTGAGATTCATTATGATTCTGATCACTCTAAGGGGAAAAGTGTATCTGATAGCTGCACTGAGAAGAGGTTGGAGTCTGATCTTGGGCGAATGAGTCTTAAAAGTGGTCTGAAGGACCCTAACGCTCGTAGTGTTCTAGTTGAGCTTGCAGACTTCAATAACGCTGTTTCTAATTCCAATCAACAGGGTGAAGAAGCTTCATATTCTAGTTCATCAAATCTGAAACCAACATATTCTTGCAACATGGAAGGGCCTTCATCTTTGGGTGATTCATTATCTGATACAGATGGGATTAGAACCTCGTGTTCCTATGTTGAGATGCCTGTTGGTGCTGGAACAAATGGAGTGCCTATTGAAGGGCCATCTGAGGAAGGATCTTGCTACCATTTGGATAACAATACTTGGTTAGTTAGGGATCAATCAAGGAATCGTTTTTCATCTAACTCTTCTTCTAATGGGCTCACAACCAGCGATTGGGGGAGATATGGAGCACCATTTTATTCATGGGGTGGACGAGTTGTTGGGAAAAGACGTCTTGAAGCTCACTCCAAAAGAAACTATGCTGATCATGAGGATGAATATGATGCATTTCTTAATATATTTGAAGGAGGTTCTCTTTTATATTGCAATATGTCTTTTGAGGCACTTCTAAATGTCAGAAAGCAACTTGAAGAGTTAGGTTTCCCTTGCAAAGCTGTAAATGATGGTCTTTGGCTTCAGATGCTTCTTAGTCAGAGAGTGCAAGAAATTGCTGCAGATACATGCAGATCTTGTTGCCTTCTGAGTATGGCTTGCACTTGCCGGCAGCCATTTGCATTTTCACATGGGGCTAGCTCCAGTGGTTTTTACATGCAAGAACATAACCAGAGTATGAGTGGGAATGTGGGCAATATATATGTTGCTGATTCTTCTGCTGGTGAAGGTAATGGCCTCTTTAGACCAGTACGAGTACATGTTAGAGGGGCTATAGATGGGCTTGCTGGTATTGGCCGTGGGACTACATTTGTTCCAGCAGCTGCCTCACCTCCTACACGTTTTGTCTTTTCTCGTGTTCCATTTGGTGTTGGCAACAGAAACTACCCACAATCTGCAGCCAATGATGATTCAGAGATGCGAACTGATCACAATGGGGACCTGTCTGGCGATGGGTTGACAGCTTTGGTTGGGTTAAGTCAAGGTGGGGGTAATGGAACAAATGTACATGGAGAGCTAACTCAAAGGGGATATGAAGTGGACCTACAAAGCAGAATGTCTGGAAGTGCTGGAGGCCCAAGTACTGGTGGCATTCCTATGCAGTTGTTAGAGACACCTGAACATAATGTTGGACTAGAGTGGGAGAATTCCAACAATTCTTCTATATCATTGGATTTGAAAACACCTTTAAACCATTTCCCACCTTTTCGTTTTGGAGTGCAATTTGAGGATGTGCACAGGCTTGGCGACGGCCAAAGTAAGCACTCACCAGAAATGTTCTATGCTGGTTCTTTATGGAAGGTCAGTGTACAGGCTTTTAATGATGAGGACCCTCAGGGAAGGCGAACCCTTGGGTTGTTTCTTCATCGTCGGAAGGCAGAGATAACTGATATACACAGAAAGGTGCACATGTATGTTGATTCTCGTGAAAAGGTTACTGCTCGCTATCAGTTGATTTGTCCGTCCAAAAGGGAGGTGATGGTTTTCGGAAGCTTTAAACAAACAGGCACTCTTCTACCCAAAGCTCCTAAAGGATGGGGTTGGCGAACTGCTCTTCTATTCGATGAGCTTGATGACCTTCTTCAAAATGGGGCCCTAAGGGTCATTGCTGTGGTGCAGCTTGTTTGA	2586	0.4567	MDPRSYPVSGPQLKMTIPPSDNDRAAAPELRALDCNNLSSLCDHIQSEGFNSGSFSDILVHALGSTFRLHRLLLSRSSYFRNMLQGPWKEASAPVVTLHVDDKNVNEEAITMALAYLYGHHPKLNDNNAFRVLAAASFLDLQDLCAICTDFIISELWTSNFLAYQVFAENQDYGIHGERVRNACWGYLCQSGGMELKEVLPKLSSQTLHALLTNDELWVPSEEKRFELALYAFLAKCAQWKTKHPEQGSSGSESGSEIHYDSDHSKGKSVSDSCTEKRLESDLGRMSLKSGLKDPNARSVLVELADFNNAVSNSNQQGEEASYSSSSNLKPTYSCNMEGPSSLGDSLSDTDGIRTSCSYVEMPVGAGTNGVPIEGPSEEGSCYHLDNNTWLVRDQSRNRFSSNSSSNGLTTSDWGRYGAPFYSWGGRVVGKRRLEAHSKRNYADHEDEYDAFLNIFEGGSLLYCNMSFEALLNVRKQLEELGFPCKAVNDGLWLQMLLSQRVQEIAADTCRSCCLLSMACTCRQPFAFSHGASSSGFYMQEHNQSMSGNVGNIYVADSSAGEGNGLFRPVRVHVRGAIDGLAGIGRGTTFVPAAASPPTRFVFSRVPFGVGNRNYPQSAANDDSEMRTDHNGDLSGDGLTALVGLSQGGGNGTNVHGELTQRGYEVDLQSRMSGSAGGPSTGGIPMQLLETPEHNVGLEWENSNNSSISLDLKTPLNHFPPFRFGVQFEDVHRLGDGQSKHSPEMFYAGSLWKVSVQAFNDEDPQGRRTLGLFLHRRKAEITDIHRKVHMYVDSREKVTARYQLICPSKREVMVFGSFKQTGTLLPKAPKGWGWRTALLFDELDDLLQNGALRVIAVVQLV*	862

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aev04g1179	861	MobiDBLite	consensus disorder prediction	245	276	-	-
	Aev04g1179	861	MobiDBLite	consensus disorder prediction	314	348	-	-
	Aev04g1179	861	Gene3D	Potassium Channel Kv1.1; Chain A	34	189	IPR011333	-
	Aev04g1179	861	PANTHER	BTB/POZ DOMAIN-CONTAINING PROTEIN	10	861	-	-
	Aev04g1179	861	Pfam	BTB/POZ domain	50	154	IPR000210	GO:0005515
	Aev04g1179	861	PANTHER	BTB/POZ DOMAIN-CONTAINING PROTEIN	10	861	-	-
	Aev04g1179	861	MobiDBLite	consensus disorder prediction	1	23	-	-
	Aev04g1179	861	ProSiteProfiles	BTB domain profile.	56	126	IPR000210	GO:0005515
	Aev04g1179	861	SUPERFAMILY	POZ domain	39	154	IPR011333	-
	Aev04g1179	861	SMART	BTB_4	56	156	IPR000210	GO:0005515
	Aev04g1179	861	MobiDBLite	consensus disorder prediction	257	276	-	-

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TR	TRAF	Aev04g1179		BTB	1.3e-13	CL0033

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aev04g1179	-		-	adu:107483601	1524.99