Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g1172 ATGGACGGCAACAAGGACGAAGCGCTGCGTTGCGTTCGAATCGCCGAGGATGCGATCGCAACTGGAAACAAAACCCGCGCCCTCAAATTCATCAGAATCGCTCAGCGACTCAATAACGATCTCAACGTTGACGCGTTGCTCAGCAAGTGCGAGCGCCTCGATTCTCAATCCTCAGCATCCTCTTCTTCTTCATCCTCTTCCTCAATGAACGGTTCAACAACGAAGAAGACTCTTAGCGACGACGGGGGTTTGAACGAAAACAGAAACTACACCGACGAGAATCTAAAATTGATTAGGGAAATTAAGTTGAAGAGCGATTACTACGCGATATTGGGCGTTGAGAAGAGTTGTTCGGTGGAAGAGATTAGAAAGGCTTATAGAAAACTCTCCTTGAAGGTTCATCCAGATAAGAACAAGGCACCGGGTTCTGAAGAGGCCTTTAAGAAGGTCTCTAAGGCATTCAAATGCTTGAGTGACGATGGTTCTAGGAGACAGTACGATCAAACTGGATTGGTCGATGAATTCGAATACAATCAGCAGTACAATGTGCCACGCCGGAGGCGGCGAACGGCCGGACCGATGTCACGCGATTTCTTCGAGGAGGATTTCGATCCCGACGAGATATTCAGGGCGTTTTTCGGACAATCCGATGTGTTTGGGAGGGCTCATGTGTACAGGACAAGGGGTGCAACTCATCATCATAGGCACGAGTTTCGTGGTGGTGGTGGTGGTGGTGGTGGTGGAGGGCTTAATATTATGCTACTTCTTCAGTTATTGCCGTTCTTGATCATTATGCTTGTTGCATACTTGCCATTTTCGGAGCCAGAGTACTCCTTGCACAAGAATCACTCTTACCCGGTTCCAAAGACTACAGAGAATTATGGGGTTCAGTTCTTTGTGAAGTCTGAAGCTTTTGATTATAGCTACCCGCAGGGGAGTCCTGCTCGTGCCACGATTGAGGACAATGTGATTAAGGACTATAGGAGTATGCTTCGGCGGTATTGTCAGATTGAGGTTCAGAGGCGTAGCTGGAATAGGAATCTGCCTACACCTCACTGTGACAAGTTACAAACCTTTGGTGTAGAAGCCTGA 1092 0.4789 MDGNKDEALRCVRIAEDAIATGNKTRALKFIRIAQRLNNDLNVDALLSKCERLDSQSSASSSSSSSSSMNGSTTKKTLSDDGGLNENRNYTDENLKLIREIKLKSDYYAILGVEKSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVSKAFKCLSDDGSRRQYDQTGLVDEFEYNQQYNVPRRRRRTAGPMSRDFFEEDFDPDEIFRAFFGQSDVFGRAHVYRTRGATHHHRHEFRGGGGGGGGGGLNIMLLLQLLPFLIIMLVAYLPFSEPEYSLHKNHSYPVPKTTENYGVQFFVKSEAFDYSYPQGSPARATIEDNVIKDYRSMLRRYCQIEVQRRSWNRNLPTPHCDKLQTFGVEA* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g1172 363 SUPERFAMILY Chaperone J-domain 105 219 IPR036869 -
Aev04g1172 363 Pfam Domain of unknown function (DUF1977) 273 343 IPR015399 -
Aev04g1172 363 CDD DnaJ 106 159 IPR001623 -
Aev04g1172 363 PRINTS DnaJ domain signature 108 126 IPR001623 -
Aev04g1172 363 PRINTS DnaJ domain signature 126 141 IPR001623 -
Aev04g1172 363 PRINTS DnaJ domain signature 142 162 IPR001623 -
Aev04g1172 363 PANTHER CHAPERONE PROTEIN DNAJ 49 1 361 - -
Aev04g1172 363 PANTHER AT29763P-RELATED 1 361 - -
Aev04g1172 363 Gene3D DnaJ domain 103 224 IPR036869 -
Aev04g1172 363 SMART dnaj_3 105 162 IPR001623 -
Aev04g1172 363 Pfam DnaJ domain 106 167 IPR001623 -
Aev04g1172 363 MobiDBLite consensus disorder prediction 56 86 - -
Aev04g1172 363 ProSiteProfiles dnaJ domain profile. 106 170 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g1172 Aev-Chr4 7470997 7472088 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g1172 101 167 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 38.028 3.22e-08 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g1172 K09518 - gmx:100789271 471.085
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g1172 04 7470997 7472088 Aev04g1172 04 7470997 7472088 ECH