Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g1154 ATGGCAGAAACGAATCACGCAGTACCATTGAACTCCTCTTCTTCAAACCCAATCCCAATCCCAACCCCAATCGCCGCCATGATCACCACCGACGAAAACCCAAGAGGCTACAACCTCAGCGGCAAGATCATGCTCACAGCCATCATCCTCTTATTCTTCCTTGTCCTCTTAATGCTCTCTCTCCACCTCTACGCTCGCTGGTACCTCACCCGAGCTCGCCGCCGCCACCATCTCCGCCGCAACCTCCGCCGCCGCCGCACCAACATCGTCTTCTACATCGACTCCCCAACCACCCTTGGGGTCACCCTTCCCTCCTCTGCCCCACGCGGCCTCGACGCCGCCGTCCTCGCCTCACTCCCCGTCTTCACCTACGACCCCAAGACCCGACCGGGAAATCCGCCGCAGGATTGCGCTGTGTGCCTCTCGGAGTTTGAACCGGGTGAAACGGGTCGGGTTTTGCCCAAATGCAACCACGCGTTCCACACCGACTGTATCGATATGTGGTTCCATAATCACGCCACGTGCCCACTTTGCCGCGCACCCGTAGAGCCCCAACCCGAATTGGAAACCCGACCCGAGGTTGTTATAACCGTTTCCGAAGCGGAAACCGGTTCGAGTTCTGGTTCGTCTCCCTCGGCGGGAGAGAATCCAGCCGGAAACGGGATGAGGAAGCTCTCACCGGTGACGGTTGAGGTCCCGGCGAGGAGTGTTGAGGGTTTCCGCGACGACTCGGGTCGCGACTCGCCGTCGTCGTTCCGGTCGCCGATGAGTCGAATGTTGTCGTTCAAGAGGATTCTGAGCAGGGAACGGAAAGGAAGCATGTCTCCTTCATCGGGTGGTGGCAGCGGCGGCGGAATTGGTAGTGGCTGTAGCTCGTCGGCCGAGTTGAACGACGCGGAGCGAGGTGAGACTCGGAGAGTTTGCTGA 927 0.5965 MAETNHAVPLNSSSSNPIPIPTPIAAMITTDENPRGYNLSGKIMLTAIILLFFLVLLMLSLHLYARWYLTRARRRHHLRRNLRRRRTNIVFYIDSPTTLGVTLPSSAPRGLDAAVLASLPVFTYDPKTRPGNPPQDCAVCLSEFEPGETGRVLPKCNHAFHTDCIDMWFHNHATCPLCRAPVEPQPELETRPEVVITVSEAETGSSSGSSPSAGENPAGNGMRKLSPVTVEVPARSVEGFRDDSGRDSPSSFRSPMSRMLSFKRILSRERKGSMSPSSGGGSGGGIGSGCSSSAELNDAERGETRRVC* 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g1154 308 MobiDBLite consensus disorder prediction 271 297 - -
Aev04g1154 308 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 102 185 IPR013083 -
Aev04g1154 308 ProSiteProfiles Zinc finger RING-type profile. 137 179 IPR001841 -
Aev04g1154 308 CDD RING-H2_PA-TM-RING 136 179 - -
Aev04g1154 308 Pfam RING-like zinc finger 136 165 IPR001841 -
Aev04g1154 308 SMART ring_2 137 178 IPR001841 -
Aev04g1154 308 MobiDBLite consensus disorder prediction 200 216 - -
Aev04g1154 308 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE 35 211 - -
Aev04g1154 308 SUPERFAMILY RING/U-box 132 188 - -
Aev04g1154 308 PANTHER RING-H2 FINGER PROTEIN ATL64 35 211 - -
Aev04g1154 308 MobiDBLite consensus disorder prediction 200 308 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g1154 Aev-Chr4 7331380 7332306 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g1154 10 280 Rapid Response to Elicitors AT3G16720 48.639 3.79e-70 218
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g1154 - - lja:Lj6g3v1468220.1 241.891
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g1154 04 7331380 7332306 Aev04g1154 04 7331380 7332306 ECH
Aev01g2927 01 31239665 31240483 Aev04g1154 04 7331380 7332306 PCT