Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aev04g1154 | ATGGCAGAAACGAATCACGCAGTACCATTGAACTCCTCTTCTTCAAACCCAATCCCAATCCCAACCCCAATCGCCGCCATGATCACCACCGACGAAAACCCAAGAGGCTACAACCTCAGCGGCAAGATCATGCTCACAGCCATCATCCTCTTATTCTTCCTTGTCCTCTTAATGCTCTCTCTCCACCTCTACGCTCGCTGGTACCTCACCCGAGCTCGCCGCCGCCACCATCTCCGCCGCAACCTCCGCCGCCGCCGCACCAACATCGTCTTCTACATCGACTCCCCAACCACCCTTGGGGTCACCCTTCCCTCCTCTGCCCCACGCGGCCTCGACGCCGCCGTCCTCGCCTCACTCCCCGTCTTCACCTACGACCCCAAGACCCGACCGGGAAATCCGCCGCAGGATTGCGCTGTGTGCCTCTCGGAGTTTGAACCGGGTGAAACGGGTCGGGTTTTGCCCAAATGCAACCACGCGTTCCACACCGACTGTATCGATATGTGGTTCCATAATCACGCCACGTGCCCACTTTGCCGCGCACCCGTAGAGCCCCAACCCGAATTGGAAACCCGACCCGAGGTTGTTATAACCGTTTCCGAAGCGGAAACCGGTTCGAGTTCTGGTTCGTCTCCCTCGGCGGGAGAGAATCCAGCCGGAAACGGGATGAGGAAGCTCTCACCGGTGACGGTTGAGGTCCCGGCGAGGAGTGTTGAGGGTTTCCGCGACGACTCGGGTCGCGACTCGCCGTCGTCGTTCCGGTCGCCGATGAGTCGAATGTTGTCGTTCAAGAGGATTCTGAGCAGGGAACGGAAAGGAAGCATGTCTCCTTCATCGGGTGGTGGCAGCGGCGGCGGAATTGGTAGTGGCTGTAGCTCGTCGGCCGAGTTGAACGACGCGGAGCGAGGTGAGACTCGGAGAGTTTGCTGA | 927 | 0.5965 | MAETNHAVPLNSSSSNPIPIPTPIAAMITTDENPRGYNLSGKIMLTAIILLFFLVLLMLSLHLYARWYLTRARRRHHLRRNLRRRRTNIVFYIDSPTTLGVTLPSSAPRGLDAAVLASLPVFTYDPKTRPGNPPQDCAVCLSEFEPGETGRVLPKCNHAFHTDCIDMWFHNHATCPLCRAPVEPQPELETRPEVVITVSEAETGSSSGSSPSAGENPAGNGMRKLSPVTVEVPARSVEGFRDDSGRDSPSSFRSPMSRMLSFKRILSRERKGSMSPSSGGGSGGGIGSGCSSSAELNDAERGETRRVC* | 309 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aev04g1154 | 308 | MobiDBLite | consensus disorder prediction | 271 | 297 | - | - | |
Aev04g1154 | 308 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 102 | 185 | IPR013083 | - | |
Aev04g1154 | 308 | ProSiteProfiles | Zinc finger RING-type profile. | 137 | 179 | IPR001841 | - | |
Aev04g1154 | 308 | CDD | RING-H2_PA-TM-RING | 136 | 179 | - | - | |
Aev04g1154 | 308 | Pfam | RING-like zinc finger | 136 | 165 | IPR001841 | - | |
Aev04g1154 | 308 | SMART | ring_2 | 137 | 178 | IPR001841 | - | |
Aev04g1154 | 308 | MobiDBLite | consensus disorder prediction | 200 | 216 | - | - | |
Aev04g1154 | 308 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE | 35 | 211 | - | - | |
Aev04g1154 | 308 | SUPERFAMILY | RING/U-box | 132 | 188 | - | - | |
Aev04g1154 | 308 | PANTHER | RING-H2 FINGER PROTEIN ATL64 | 35 | 211 | - | - | |
Aev04g1154 | 308 | MobiDBLite | consensus disorder prediction | 200 | 308 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aev04g1154 | Aev-Chr4 | 7331380 | 7332306 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aev04g1154 | 10 | 280 | Rapid Response to Elicitors | AT3G16720 | 48.639 | 3.79e-70 | 218 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aev04g1154 | - | - | lja:Lj6g3v1468220.1 | 241.891 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Aev04g1154 | 04 | 7331380 | 7332306 | Aev04g1154 | 04 | 7331380 | 7332306 | ECH | |
Aev01g2927 | 01 | 31239665 | 31240483 | Aev04g1154 | 04 | 7331380 | 7332306 | PCT |