Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g1152 ATGGCAGGAGGAAACAATAATGGTAATCCTAGCAATGAACAGAAGAGGAAATTTGCAATTCTTGGTGTTTCCTCAATCCTTCTTGTGGCAATGGTAGCTGCTGTGGCTATTGGTGTAACAAGAGGAGGATCAAAAGGAGAAGGAGATTCTAATTCTCAAGATAACCAAATTGCAAGCCATCAAAAAAATGTTGAGGTTCTCTGCCAAACAACAGAATACAAAGAGACATGTCAGAAAAGCCTCTCAGAGGCATCAAACCAAACATCAGATATAAAGGAATTGGTGAAAGCTGCATTTACTGCTACCTCAGAAGAGTTAGTAAAGCATATCAACAATTCCACATTGTATCAAGAATTGGCTAAAGATAACATGACAAGACAAGCTATGGATATATGCAAGGAAGTTTTGGATTATGCAGTTGATGATATACAAAGATCTATTAGCACATTGGACAAGTTTGATCTAAGCAAGATTAGTGAATATGCTTATGATCTTAAGGTTTGGATTGCTGGCACAATTTCACACCAGCAAACTTGCTTGGATGGATTTGAGAACTCCACAACAAAAGCCGGCGAGACGATGGCTAAGGCCTTGAACACATCTTTGGAGCTCAGTAGCAATGCATTGGACATGATCGATGGCGTTTCGGGTTTCTTGACTAGCCTCAATTTGGATTCCTTTGGTAGTAGTAATAGCAGGAGGCTCTTTTCTGAGGAGGAAGAATCGTTGAATGAGAATGATGGTGTTCCTTCTTGGGTCAGCGAAGCGCAGAGGAGGCTTCTTGAGGCTCCTGCAGCGGCGCCCGGTGCTTTTGAATATTCTTCTTCTGCTCCTGCAGCAGCTCCTACAGCAGCAGTAGGAGGTGCTGCTGATTCTTCTTCTGTTGCAGCAGCAGGAGGTGCTACCAGTTCTGCTGCTGTAGCAGAAGGAGGGCTTGGAAACGTCACACCGGATGCGGTTGTGGCTCAAGATGGGAGTGGAAAGTTTAAAACACTTGTTGAGGCACTTAAGACAGTTCCAAAGAAGAACAAAAAGAATTTTGTGATTTATGTTAAGGCTGGTGTGTACAAAGAGACTGTGATTTTGGATAAGAGTATGACTTTTGTCACAATCATTGGAGATGGCCCTTCCAAAACCATATTCACCGGTAGCTTAAACTTTGTTGACGGTGTCCAAACTTATAACACTGCAACCTTTGGTGTGAATGCTGCTAACTTCATGGCCAAGGGAGTCGGATTCGTGAACTCGGCCGGAGCAGAGAAGCACCAAGCAGTTGCACTCAGAGTAACAGCAGACAAGGCAGTTTTCTACAACTGCAGAATGGACGGTTACCAAGACACGCTCTACACGCAATCCCAACGCCAATTCTACCGAGACTGCACCATATCAGGCACGGTAGACTTCATATTCGGCGACGCGGTCGGCGTGTTCCAAAACTGCAAGCTAGTAGTAAGGAAGCCCTTAGACAACCAGCAGTGCATGGTGACAGCAGGAGGCAGGGCAAAAGTAGACAGCCCTTCTGCCTTAGTTTTCCAGAGCTGCTACTTCACCGGCGAGCCGGCCATCGCTGCCTTGACGCCCAAGATATCATATTTGGGCAGGCCTTGGAGGCTCTACTCCAAGGTTGTGATCATGGACTCACAAATTGATGACATATTTGTCCCACAAGGGTACATGCCATGGATGGGAGTTGCATTTAAGGACACATGTACCTATTATGAGTATAATAACAAGGGTCCTGGTGCTAACACCAATTTAAGGGTTAAATGGCCTGGTGTTAAGGTCATAACAGCTGATCAAGCTGCTGATTACTATCCAGGAAAGTTCTATCAGATTGCTAATTCTACTGACAGAGATTCTTGGATCCTTAATTCTGGGGTACCCTATTCCCTTGGTCCTCTTGCAAGCACTGCCACATCATTGCCTCAGTAG 1932 0.4498 MAGGNNNGNPSNEQKRKFAILGVSSILLVAMVAAVAIGVTRGGSKGEGDSNSQDNQIASHQKNVEVLCQTTEYKETCQKSLSEASNQTSDIKELVKAAFTATSEELVKHINNSTLYQELAKDNMTRQAMDICKEVLDYAVDDIQRSISTLDKFDLSKISEYAYDLKVWIAGTISHQQTCLDGFENSTTKAGETMAKALNTSLELSSNALDMIDGVSGFLTSLNLDSFGSSNSRRLFSEEEESLNENDGVPSWVSEAQRRLLEAPAAAPGAFEYSSSAPAAAPTAAVGGAADSSSVAAAGGATSSAAVAEGGLGNVTPDAVVAQDGSGKFKTLVEALKTVPKKNKKNFVIYVKAGVYKETVILDKSMTFVTIIGDGPSKTIFTGSLNFVDGVQTYNTATFGVNAANFMAKGVGFVNSAGAEKHQAVALRVTADKAVFYNCRMDGYQDTLYTQSQRQFYRDCTISGTVDFIFGDAVGVFQNCKLVVRKPLDNQQCMVTAGGRAKVDSPSALVFQSCYFTGEPAIAALTPKISYLGRPWRLYSKVVIMDSQIDDIFVPQGYMPWMGVAFKDTCTYYEYNNKGPGANTNLRVKWPGVKVITADQAADYYPGKFYQIANSTDRDSWILNSGVPYSLGPLASTATSLPQ* 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g1152 643 CDD PMEI-like_3 67 217 - -
Aev04g1152 643 Gene3D Invertase/pectin methylesterase inhibitor family protein 58 215 IPR035513 -
Aev04g1152 643 PANTHER PECTINESTERASE 315 636 - -
Aev04g1152 643 PANTHER PECTINESTERASE 10 268 - -
Aev04g1152 643 ProSitePatterns Pectinesterase signature 1. 343 362 IPR018040 -
Aev04g1152 643 Pfam Pectinesterase 318 609 IPR000070 GO:0030599|GO:0042545
Aev04g1152 643 ProSitePatterns Pectinesterase signature 2. 462 471 IPR033131 -
Aev04g1152 643 TIGRFAM PME_inhib: pectinesterase inhibitor domain 58 213 IPR006501 GO:0004857
Aev04g1152 643 Gene3D - 315 634 IPR012334 -
Aev04g1152 643 PANTHER PECTINESTERASE 315 636 - -
Aev04g1152 643 PANTHER PECTINESTERASE 10 268 - -
Aev04g1152 643 SMART PMEI_2 59 211 IPR006501 GO:0004857
Aev04g1152 643 Pfam Plant invertase/pectin methylesterase inhibitor 64 211 IPR006501 GO:0004857
Aev04g1152 643 SUPERFAMILY Pectin lyase-like 317 631 IPR011050 -
Aev04g1152 643 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 62 213 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g1152 Aev-Chr4 7321215 7323554 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g1152 12 642 Carbohydrate Esterase AT3G05610 42.047 2.29e-179 523
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g1152 K01051 - gmx:100784682 781.556
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g1152 04 7321215 7323554 Aev04g1152 04 7321215 7323554 ECH
Aev01g2926 01 31235516 31237309 Aev04g1152 04 7321215 7323554 PCT