Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g1140 ATGTGTGGAGGAGCTATCATCTCAGACTTCATTGGCGTCAAGCGTGGCCGGAAATTGGCCCCTCAGGACATATGGGCTGAGATTGACCCTTTTTCTGACCTTCTTGGCTTTGACACCACCACCACCACTCCCAACCTCCCTCAATTCTCACCACATAACAAAGTGGTGGCACGTGACAAGAAGGTAGAGGAGAAGCTGGCGGTGGTGGGCGCAGAAAAGAAGGCACCAGGGAATAATATTAGTAGTAATAATAAGAGCAACAGGGGTGGTCGTCAAAATCAGAGAGCACGCAAGAACGTGTACAGAGGTATCAGGCAAAGGCCATGGGGCAAGTGGGCCGCAGAGATAAGGGACCCACACAAGGGCGTCCGCGTCTGGCTCGGCACCTTCAACACCGCCGAGGAGGCCGCTAGGGCCTATGATGACGCCGCGAAGAAAATTCGCGGCGACAAGGCCAAGCTCAATTTCCCCGTCACCGCATCTAGCCGTGACGAGGTTGAGTCTCTACCACCGGCTAAAAAGCGGTGCCTGAGTGATGCTGAACTGACCGGACTTTCTCCTGCTAGTCCGGTTAGTTCTGATCTCTCTGGCTCATCACTAGTCTCCACTGTCTATAACGGTGGAGAGAGTGATGGTGGCCAGGAGATGGACCTGAAGAAGCAGATCTCAGACCTTGAATGGTTTCTTGGGCTGGAGAATGAGCAACCATCACTAATGAACGGTCCAGATTGGAACAATAACAACAACAACATGGACCTGTGGATGCTGGACGATGTTGTTATGCCCAACCGTTACATGGTGTACTAG 807 0.5254 MCGGAIISDFIGVKRGRKLAPQDIWAEIDPFSDLLGFDTTTTTPNLPQFSPHNKVVARDKKVEEKLAVVGAEKKAPGNNISSNNKSNRGGRQNQRARKNVYRGIRQRPWGKWAAEIRDPHKGVRVWLGTFNTAEEAARAYDDAAKKIRGDKAKLNFPVTASSRDEVESLPPAKKRCLSDAELTGLSPASPVSSDLSGSSLVSTVYNGGESDGGQEMDLKKQISDLEWFLGLENEQPSLMNGPDWNNNNNNMDLWMLDDVVMPNRYMVY* 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g1140 268 SUPERFAMILY DNA-binding domain 100 158 IPR016177 GO:0003677
Aev04g1140 268 Pfam AP2 domain 100 149 IPR001471 GO:0003700|GO:0006355
Aev04g1140 268 MobiDBLite consensus disorder prediction 76 94 - -
Aev04g1140 268 Gene3D AP2/ERF domain 100 159 IPR036955 GO:0003700|GO:0006355
Aev04g1140 268 PANTHER EREBP TRANSCRIPTION FACTOR 1 174 - -
Aev04g1140 268 PANTHER DNA-BINDING DOMAIN 1 174 IPR044808 GO:0003700|GO:0009873
Aev04g1140 268 PRINTS Ethylene responsive element binding protein signature 101 112 IPR001471 GO:0003700|GO:0006355
Aev04g1140 268 PRINTS Ethylene responsive element binding protein signature 123 139 IPR001471 GO:0003700|GO:0006355
Aev04g1140 268 ProSiteProfiles AP2/ERF domain profile. 100 157 IPR001471 GO:0003700|GO:0006355
Aev04g1140 268 SMART rav1_2 100 163 IPR001471 GO:0003700|GO:0006355
Aev04g1140 268 MobiDBLite consensus disorder prediction 71 98 - -
Aev04g1140 268 CDD AP2 101 159 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g1140 Aev-Chr4 7238703 7240693 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g1140 1 260 AP2-EREBP Transcription Factor Family AT3G16770 43.262 1.91e-57 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Aev04g1140 AP2 7.7e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g1140 K09286 - gmx:100817253 261.922
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g1140 04 7238703 7240693 Aev04g1140 04 7238703 7240693 ECH
Aev01g2922 01 31209408 31210993 Aev04g1140 04 7238703 7240693 PCT