Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g1123 ATGAATCTGAGCAACGGGAAGGGGTACATGTCAACGGCTAGTTCAAGCTCGATGCTGAAATCCGCCGCCGGAGACGCCGTCTCCGACCAGTTTCCGGCGGGCCTTAGGGTTCTGGTCGTGGATGATGACCCCACTTGCCTTGTGATCCTTGAGAGGATGCTCAAAGCTTGTCTCTATGAAGTTACGAAATGCAAGCGAGCAGAGGTTGCATTGTCTCTTCTGAGAGAGAACAAGAATGGGTTTGACATTGTTATCAGTGATGTGCATATGCCTGACATGGATGGATTCAAACTCTTGGAGCATATTGGGTTGGAGATGGACCTACCGGTCATTATGATGTCGGCGGACGATGGAAAACAGGTTGTTATGAAGGGTGTGACACATGGTGCTTGTGATTACCTAATCAAACCTGTGCGCATCGAGGCTCTGAAGAATATATGGCAGCATGTGGTTCGGAAGAGAAAGAATGGGAGTAAAGAGCCGGAGCAATCGGGCAGTGTAGAAGAAGGAGATCGGCTGCTTAGGGCATTTGATGATGCAGATTACTCATCGTCAGCAAATGAAGGGAAAAGTTCAAAGAAGAAGAGGGACGATGAAGAAGAAACGGAGGAGAGGGATGATGGTTCCACATTGAAGAAGCCGCGGGTTGTTTGGTCTGTTGAGCTCCATCAACAGTTTATGTCTGCCGTGAATCATCTGGGAATTGACAAGGCTGTCCCAAAAAAGATTTTGGAATTGATGAATGTTCCTGGACTTACTAGAGAAAATGTTGCCAGCCACCTTCAGAAATACCGTCTGTATCTTCGAAGGTTGAGTGGAGTTTCCCAGCAGCAGGGTAACTCCTTCTTGAGCCCACACGACGAATTGTTCGGGACAACTACACTCAGTGGAATTGATCTTCGAGCTCTTTCGGTGGGTCAACTCCCATCACATAGCCTAGCCAGGCTTCAAACTGTAGGATTTGGCGGGCCAACTGTGAAGCCAGGTATGCCGATGCCTGTAGTTGAGCAGAGGAACCTTTTCAGTTTTGAAAACCCAAGATTAAGATTCGGGGATGGGCAAATGCAACATATGAACACCAGTAGACCAATGAACTTGCTTCACGGAATCCCTACCAACATGGAGCCAAGGCATCTTGCCAGTTTGCAACAATCTACTACCCAGTCACTTGCCAACTTGAATATGCGAGTCAATGCTTCTGTTTCCCAGAGAAGCCCCTTGTTGATGCAGATAGGTCAATCCCAGCCAAGAGGACACATACTAGGTGAAAACTCGGGTTCTAATGTTAACAGGCTCCCATCACCGTTGTTGCAGCCTACATTACCAAATGGAATTTCTAACGATGTTCTGGGAAACGGGATTGCTAGTTCCAGCAACCTGAATCCTGGTTACAATCAAGTTCCACAAGGCTCTACATCGATGAGTTTTCCCATGAATCAAACCAGCAATATGTCGATCAGTAGTTTTACTCTCGGAAGCAATCCAGTTATGTCCACTGTCTCATCAAAAGGCATGTTACAAGAGGATGTTAATTCAGGAATCAAAGGATCCAGCGGATTTGTTCCAAGTTATGACATTTTTGAAGAACTCCACAATCAGAAGTCCCATGATTGGGATTTAACGAACCCTGGCCTGGCATTCGACGCTGCTCAGCATGCAAATCCTTCACAAGGTAACATTGATGTCTCGGTCGCACCATCAGTTTTAGTCCATCAGAATTTTTCCTCTATTCAACAGACCGGTCAAAATGGAGATACTACTTCAATTGGAAACGCTATGTTCGGCATAGGCGAAGGCATGGATCAAGGCAATCTCCAAAATGTTAGCCAACCCTTCAATCCACTTCTTGTTGACAATTCTGAAATAGTTACATCCCAAAGAGTTAATGGTGAAAGCTCCCATACTAACCTCTTCCCTGAGCAATTCGGGCAGGAGGATCTCATGAGTGCGCTTCTGAAACAGCAGGAAGGCATTGAACAAGCTGAGAATGAGTTTGACTTTGATGGATATATTCCTTAG 2019 0.4611 MNLSNGKGYMSTASSSSMLKSAAGDAVSDQFPAGLRVLVVDDDPTCLVILERMLKACLYEVTKCKRAEVALSLLRENKNGFDIVISDVHMPDMDGFKLLEHIGLEMDLPVIMMSADDGKQVVMKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNGSKEPEQSGSVEEGDRLLRAFDDADYSSSANEGKSSKKKRDDEEETEERDDGSTLKKPRVVWSVELHQQFMSAVNHLGIDKAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLSGVSQQQGNSFLSPHDELFGTTTLSGIDLRALSVGQLPSHSLARLQTVGFGGPTVKPGMPMPVVEQRNLFSFENPRLRFGDGQMQHMNTSRPMNLLHGIPTNMEPRHLASLQQSTTQSLANLNMRVNASVSQRSPLLMQIGQSQPRGHILGENSGSNVNRLPSPLLQPTLPNGISNDVLGNGIASSSNLNPGYNQVPQGSTSMSFPMNQTSNMSISSFTLGSNPVMSTVSSKGMLQEDVNSGIKGSSGFVPSYDIFEELHNQKSHDWDLTNPGLAFDAAQHANPSQGNIDVSVAPSVLVHQNFSSIQQTGQNGDTTSIGNAMFGIGEGMDQGNLQNVSQPFNPLLVDNSEIVTSQRVNGESSHTNLFPEQFGQEDLMSALLKQQEGIEQAENEFDFDGYIP* 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g1123 672 Coils Coil 644 664 - -
Aev04g1123 672 Gene3D - 210 272 - -
Aev04g1123 672 PIRSF RR_ARR_type-B 10 669 IPR017053 GO:0003677|GO:0003700|GO:0009736
Aev04g1123 672 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 213 266 IPR006447 GO:0003677
Aev04g1123 672 ProSiteProfiles Response regulatory domain profile. 36 151 IPR001789 GO:0000160
Aev04g1123 672 MobiDBLite consensus disorder prediction 188 210 - -
Aev04g1123 672 Gene3D - 35 168 - -
Aev04g1123 672 MobiDBLite consensus disorder prediction 182 210 - -
Aev04g1123 672 Pfam Response regulator receiver domain 37 145 IPR001789 GO:0000160
Aev04g1123 672 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 212 269 IPR017930 -
Aev04g1123 672 CDD REC_typeB_ARR-like 37 151 - -
Aev04g1123 672 PANTHER TWO-COMPONENT RESPONSE REGULATOR 10 591 - -
Aev04g1123 672 SUPERFAMILY CheY-like 34 156 IPR011006 -
Aev04g1123 672 Pfam Myb-like DNA-binding domain 215 265 IPR001005 -
Aev04g1123 672 SUPERFAMILY Homeodomain-like 210 270 IPR009057 -
Aev04g1123 672 SMART REC_2 35 147 IPR001789 GO:0000160
Aev04g1123 672 PANTHER TWO-COMPONENT RESPONSE REGULATOR 10 591 IPR045279 GO:0009736
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g1123 Aev-Chr4 7067087 7070591 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g1123 69 670 Response Regulator Gene Family AT3G16857 47.853 1.30e-154 459
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Aev04g1123 Response_reg 2.6e-22 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g1123 - K14491 gmx:100814930 933.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g1123 04 7067087 7070591 Aev04g1123 04 7067087 7070591 ECH
Aev01g2906 01 31120773 31124196 Aev04g1123 04 7067087 7070591 PCT