Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g1120 ATGTCGCTGAGGCCAAATGAGAGGACGGAGGTTCGCAGGAACAGGTACAAGGTGGCGGTGGACGCTGATGAGGGACGGCGGAGGAGGGAGGACAACATGGTGGAGATCCGGAAGAGTAAGCGTGAGGAGAGTCTCCAGAAGAAGCGCCGCGAGGGTCTCCAAGCTCACCAGCTTCAACAGCAGTTCCCAACCACTCTTCAATCCTCGTCTATTCTTGAGAAAAAGTTAGAGAGTCTTCCTGCTATGGTTGCTGGGGTGTGGTCCGATGATAACAACCAGCAGCTGGAAGCAACCACACAGTTTCGAAAGCTGCTTTCCATCGAGCGTAGCCCTCCGATTGAGGAAGTTATTCAATCTGGTGTTGTCCCACGGTTCGTTCAGTTTTTAGTTAGGGAGGATTTCCCTCAGCTTCAGTTTGAGGCTGCATGGGCTCTCACAAACATAGCATCCGGAACATCTGAGAACACTAAGGTGGTAATTGATCATGGGGCGGTCCCAATATTTGTCAAGTTACTCAGCTCTCCTAGTGATGATGTTCGGGAGCAGGCTGTGTGGGCATTGGGAAATGTTGCTGGTGACTCTCCTAGGTGCCGTGATCTTGTTCTCAGCAATGGTGCCCTGATCCCACTATTAGCCCAGTTGAATGAGCATGCAAAACTTTCAATGCTGAGAAATGCCACATGGACCCTGTCAAACTTCTGCAGGGGGAAGCCACAGCCTCCATTTGATCAGGTGAGGCCAGCACTTCCAGCTCTTGAGCGTTTGGTTTTCTCCAATGATGAAGAGGTTCTGACCGATGCATGCTGGGCACTATCATATCTTTCTGATGGAACAAATGACAAAATCCAAGCAGTAATTGAGGCTGGTGTATGTGGCAGGCTCGTGGAGCTTCTTCTGCACCCATCTCCTTCAGTGTTGATTCCTGCTCTTCGAACTGTGGGAAATATTGTGACTGGAGATGATATTCAAACTCAGTCTATTATCAATCACGGTGCACTCCCATGCCTTTTGAGCTTGCTGACACATAATCATAAAAAAAGCATCAAGAAAGAAGCATGCTGGACTATATCAAACATTACAGCTGGAAACAGAGACCAAATTCAGGCTGTGATTGAAGCTGGTCTGATTGCACCCCTTGTCAACCTTCTTCAAAATGCTGAGTTTGACATTAAAAAAGAAGCAGCATGGGCAATCTCCAATGCTACATCTGGTGGTACTCATGAGCAGATCAAGTATTTGGTCAGCCAAGGTTGTATTAAGCCTCTGTGCGATCTGCTTGTTTGCCCCGACCCAAGAATTGTCACTGTCTGTTTAGAAGGCCTAGAGAATATTCTCAAGGTTGGGGAAGCTGAGAAGACCTTGGGTAACACTGGAGATGTGAATGTGTATGCTCAGATGATAGATGATGCTGAGGGATTGGAGAAGATTGAAAACCTGCAGAGTCATGACAACAATGAAATATATGAGAAGGCTGTTAAAATACTCGAAACATACTGGTTGGAAGACGAAGATGACACGCTGCCTCCTGGCGATGCTGCTCAACCTGGTTTCAATTTCGGCGGCAATGAGCTTCCAGTCCCATCTGGTGGATTCAACTTTAGTTGA 1605 0.476 MSLRPNERTEVRRNRYKVAVDADEGRRRREDNMVEIRKSKREESLQKKRREGLQAHQLQQQFPTTLQSSSILEKKLESLPAMVAGVWSDDNNQQLEATTQFRKLLSIERSPPIEEVIQSGVVPRFVQFLVREDFPQLQFEAAWALTNIASGTSENTKVVIDHGAVPIFVKLLSSPSDDVREQAVWALGNVAGDSPRCRDLVLSNGALIPLLAQLNEHAKLSMLRNATWTLSNFCRGKPQPPFDQVRPALPALERLVFSNDEEVLTDACWALSYLSDGTNDKIQAVIEAGVCGRLVELLLHPSPSVLIPALRTVGNIVTGDDIQTQSIINHGALPCLLSLLTHNHKKSIKKEACWTISNITAGNRDQIQAVIEAGLIAPLVNLLQNAEFDIKKEAAWAISNATSGGTHEQIKYLVSQGCIKPLCDLLVCPDPRIVTVCLEGLENILKVGEAEKTLGNTGDVNVYAQMIDDAEGLEKIENLQSHDNNEIYEKAVKILETYWLEDEDDTLPPGDAAQPGFNFGGNELPVPSGGFNFS* 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g1120 534 Gene3D - 11 50 IPR036975 GO:0006606
Aev04g1120 534 Pfam Importin beta binding domain 12 99 IPR002652 GO:0006606|GO:0061608
Aev04g1120 534 Gene3D - 77 500 IPR011989 -
Aev04g1120 534 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 374 402 IPR000225 GO:0005515
Aev04g1120 534 SUPERFAMILY ARM repeat 6 505 IPR016024 -
Aev04g1120 534 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 163 205 IPR000225 GO:0005515
Aev04g1120 534 MobiDBLite consensus disorder prediction 23 54 - -
Aev04g1120 534 SMART arm_5 406 446 IPR000225 GO:0005515
Aev04g1120 534 SMART arm_5 109 150 IPR000225 GO:0005515
Aev04g1120 534 SMART arm_5 152 192 IPR000225 GO:0005515
Aev04g1120 534 SMART arm_5 320 361 IPR000225 GO:0005515
Aev04g1120 534 SMART arm_5 237 276 IPR000225 GO:0005515
Aev04g1120 534 SMART arm_5 278 318 IPR000225 GO:0005515
Aev04g1120 534 SMART arm_5 363 403 IPR000225 GO:0005515
Aev04g1120 534 SMART arm_5 193 235 IPR000225 GO:0005515
Aev04g1120 534 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 120 163 IPR000225 GO:0005515
Aev04g1120 534 PANTHER IMPORTIN SUBUNIT ALPHA 2 525 - -
Aev04g1120 534 Pfam Atypical Arm repeat 461 505 IPR032413 -
Aev04g1120 534 PANTHER IMPORTIN ALPHA 2 525 - -
Aev04g1120 534 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 331 374 IPR000225 GO:0005515
Aev04g1120 534 PIRSF Importin_alpha 2 533 IPR024931 GO:0005737|GO:0006606|GO:0061608
Aev04g1120 534 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 247 289 IPR000225 GO:0005515
Aev04g1120 534 Pfam Armadillo/beta-catenin-like repeat 363 402 IPR000225 GO:0005515
Aev04g1120 534 Pfam Armadillo/beta-catenin-like repeat 279 317 IPR000225 GO:0005515
Aev04g1120 534 Pfam Armadillo/beta-catenin-like repeat 110 150 IPR000225 GO:0005515
Aev04g1120 534 Pfam Armadillo/beta-catenin-like repeat 152 191 IPR000225 GO:0005515
Aev04g1120 534 Pfam Armadillo/beta-catenin-like repeat 323 361 IPR000225 GO:0005515
Aev04g1120 534 Pfam Armadillo/beta-catenin-like repeat 407 444 IPR000225 GO:0005515
Aev04g1120 534 Pfam Armadillo/beta-catenin-like repeat 248 275 IPR000225 GO:0005515
Aev04g1120 534 Pfam Armadillo/beta-catenin-like repeat 194 235 IPR000225 GO:0005515
Aev04g1120 534 ProSiteProfiles IBB domain profile. 1 58 IPR002652 GO:0006606|GO:0061608
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g1120 Aev-Chr4 7042515 7045768 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g1120 135 395 U-box Gene Family AT3G46510 25.191 4.06e-10 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g1120 K15042 - gmx:100808498 1012.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g1120 04 7042515 7045768 Aev04g1120 04 7042515 7045768 ECH