Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g1117 ATGTCGCAAGGAACCAGTCTGGCGCTGGAATCGTCTGAAAATGGCACAGATTTGTCTCAGAATGACATTGGCACCATTGAGGAAACACCAGAGGAAACAATTTTGTCAAGACAAACTTCTGTCAATCTTGTTCCTTTTATTGGTCAAAGATTTGTTTCTCAAGAAGCTGCATATGAATTTTACTGCAGCTTTGCTAAACAGTGCGGCTTTTCTATTCGGCGACACCGTACTCGAGGGAAGGATGGTGTTGGCCGTGGAGTTACGAGGAGGGATTTTACTTGCCATCGAGGTGGATACCCCCAGGTTAAACCTTCTGATGATGCAAAGATGCAAAGGAACCGCAAATCGTCTCGTTGTGGTTGCCAAGCATACATGCGTATCGTGAAAAAGGCAGAATTTGATGTCCCTGAATGGCGTGTTACAGGTTTTAGCAACGTCCACAATCACGAGTTGTTAAAATCCAATGAGGTGCGCCTTCTTCCTGCATACTGTACAATATCTCCTGATGACAAGAGTCGTATATGCATGTTTGCTAAAGCTGGAATGTCAGTGAGGCAAATGTTAAGATTGATGGAGCTAGAGAAAGGCATCAAGCTTGGTTGTCTTCCTTTTACAGAGATGGATGTGAGAAACTTGTTACAGTCTTTCAGAAATGTTGATAGCGATAATGATGCCATTGATCTTATTGCTATGTGCAAGAGATTGAAAGATGAAAATCAAAACTTCAGGTATGAATTCAAGATAGATGGTAATAACAGGCTTGAGCATATTGCATGGTCCTACAGCTCCTCTGTTCAATCATATGAGGCATTCGGAGATGCTGTGGTTTTTGACACAACGCACCGAATGGAAGCCTATGACATGCTGTTGGGACTTTGGCTTGGAGTGGACAATCACGGGATGACTTGTTTCTTTGGTTGTACACTTCTACGGGATGAAAACATGCAATCTTTTTCATGGGCTTTAAAGGCTTTCATGAGCTTCATGAAAGGAAAGGCTCCGCAAACAATATTAACAGATCATAACATGTGGCTGAAAGAAGCTATTGCTGTTGAAATGCCTGAAACTAAACATGCTTTTTGTATATGGCATATTCTTTCTAAGTTCTCTGACTGGTTTTCAGTACTACTTGGATCTCATTATGATGAGTGGAAAGCTGATTTCCACCGGCTCTACAATTTGGAACTAGTGGAAGATTTTGAAGAAGGCTGGAGGCAAATGGTTGATAAATATAGACTCCACACAAACAAACATATCATTAGCCTATATTCATTAAGGACATTTTGGGCTTTACCATTCTTGAGGCGTTACTTCTTTGCTGGATTGACCAGCACGTGTGAATCTGAGTCCATTAACGCTTTCATCCAACGGTTCTTGAGTGCCCAATCTCAACTCGACCGCTTTGTAGAGCAAGTGGCTGATATTGTTGATTTTAATGACCGGGCTGGGGCAAAGCAAAAGATGCAAAGAAAAACACAGAAAGTGTGCCTCAAAGCAGGTTCACCTATTGAATCCCATGCTGCCAATGTACTGACTCCTTATGCCTTAAGTAAACTCCAGGATGAGCTTGTTTTGGCGCCACAATATGCATCGTTTCTAGTTGATGAAGGTTGTTTCCAGGTCAGACACCACACACAGACAGATGGAGGGTGCAAAGTATTTTGGATTCCTTGTCAAGAGCACATTAGCTGCAGCTGCCACCTGTTCGAGTTTTCAGGCATCTTATGCAGACATGTGCTACGTGTCATGTCAACAAATAACTGTTTCCACATCCCTGACCAATATCTACCTACCCGTTGGAGAGGCAGTGGTTTATCTTCTGTCAACCACTTTCGCGGTGCAACGACTAGGGATCAGCCTGAAAAGATACAATTTTTGGAATCGATGGCTTCCACACTCATAGTGGAATCCATTGAAACAGAGGAACGCCTTGATGTTGCTTGCGAGCAAGTTTCCATGGTGCTATCACGTATCAAAGCCCTTCCTCGGCCGGCAGTAGCACATGGAGTAAATGATATGGCGTATAGTTATTCATCGGATTCATTGATCCTACCAGAGGTAGAAGATGCTGATGGAATAATTCATGGTTTTACAATTGCGAACCCCCATGATTCTTTCTCTATAGGAAAGCTAAAGGAGAGAAGGGGAAGAGATGGAGTTGACGTCACAAGGAAGCGTAGGCAGTTATCGGGGCCATTGTCTACACAATATGGGCATGATCCATCTGATTGCTCAATGATGGCATGTGATAATCTAAGCGGAGATGCATTAGGGTATTTGTAG 2283 0.4297 MSQGTSLALESSENGTDLSQNDIGTIEETPEETILSRQTSVNLVPFIGQRFVSQEAAYEFYCSFAKQCGFSIRRHRTRGKDGVGRGVTRRDFTCHRGGYPQVKPSDDAKMQRNRKSSRCGCQAYMRIVKKAEFDVPEWRVTGFSNVHNHELLKSNEVRLLPAYCTISPDDKSRICMFAKAGMSVRQMLRLMELEKGIKLGCLPFTEMDVRNLLQSFRNVDSDNDAIDLIAMCKRLKDENQNFRYEFKIDGNNRLEHIAWSYSSSVQSYEAFGDAVVFDTTHRMEAYDMLLGLWLGVDNHGMTCFFGCTLLRDENMQSFSWALKAFMSFMKGKAPQTILTDHNMWLKEAIAVEMPETKHAFCIWHILSKFSDWFSVLLGSHYDEWKADFHRLYNLELVEDFEEGWRQMVDKYRLHTNKHIISLYSLRTFWALPFLRRYFFAGLTSTCESESINAFIQRFLSAQSQLDRFVEQVADIVDFNDRAGAKQKMQRKTQKVCLKAGSPIESHAANVLTPYALSKLQDELVLAPQYASFLVDEGCFQVRHHTQTDGGCKVFWIPCQEHISCSCHLFEFSGILCRHVLRVMSTNNCFHIPDQYLPTRWRGSGLSSVNHFRGATTRDQPEKIQFLESMASTLIVESIETEERLDVACEQVSMVLSRIKALPRPAVAHGVNDMAYSYSSDSLILPEVEDADGIIHGFTIANPHDSFSIGKLKERRGRDGVDVTRKRRQLSGPLSTQYGHDPSDCSMMACDNLSGDALGYL* 761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g1117 760 SMART 26again6 562 589 IPR006564 GO:0008270
Aev04g1117 760 Pfam FAR1 DNA-binding domain 59 152 IPR004330 -
Aev04g1117 760 PANTHER FAR1 DNA BINDING DOMAIN, ZINC FINGER, SWIM-TYPE, MULE TRANSPOSASE DOMAIN, FHY3/FAR1 FAMILY-RELATED 8 740 - -
Aev04g1117 760 MobiDBLite consensus disorder prediction 1 22 - -
Aev04g1117 760 Pfam MULE transposase domain 275 367 IPR018289 -
Aev04g1117 760 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 8 740 IPR031052 GO:0006355
Aev04g1117 760 MobiDBLite consensus disorder prediction 717 740 - -
Aev04g1117 760 Pfam SWIM zinc finger 561 584 IPR007527 GO:0008270
Aev04g1117 760 ProSiteProfiles Zinc finger SWIM-type profile. 539 587 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g1117 Aev-Chr4 7028357 7031098 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aev04g1117 MULE 4.5e-22 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g1117 - - gmx:100778434 1392.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g1117 04 7028357 7031098 Aev04g1117 04 7028357 7031098 ECH