Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g1107 ATGAGTAATACATCAGAAAGCCCTAGCAGCTTTTTTGATAACCCTACAAGAGATCCCACCAAAGCTTCACCAACTTTGAAGCTCTTTGGTTTCCCCCTAACTCCATCGCAAGATGAGGATGAGGAGAACAAGAGTAAGGTGTTCAAGTGCCTTTTCTGCTTCCGGGAATTCGCCAATTCTCAAGCACTTGGTGGGCACCACAATGCTCACAAGAAAGAGCGCCAAAGGGCCACACTTGCACGCTTCCAACACGCTCCTCCTCTTCCTCTTCCCCTTCCCCTTCCCATCCATCCCCATCACCAACGCTTCCTACATTCCCCTTATCATCATGTTCCTATCCCATCATCACCATCGGGGCCGTTCATTCGTCCACATCATCGTCGTCATGATCACAGAGGAGCTTATTCGTTCCCTCCTACTGCAAGGGTCCCACAAGCTTTGTCCTCTATGATCCATCCTCACCATAAGGATCCTTTCAATGACGATGATGATGATGATCTTCCTCGTGTTGTTGGAAGACAAAATGGTAGTGGTAGTGGTGGTGGTGATGGTGGTGTAGGAGGCATGGCAAAAGAAAAAGAAGAGCCACTATTAGAAGTAGTACAGAATATTGATGATGATGATGTTGATGTTGATCTTAACTTGAGCCTAGCTCATCACATAATACCCTCCACTTCCAAGCACAATAACATTAATTACAAGGAATAG 708 0.4619 MSNTSESPSSFFDNPTRDPTKASPTLKLFGFPLTPSQDEDEENKSKVFKCLFCFREFANSQALGGHHNAHKKERQRATLARFQHAPPLPLPLPLPIHPHHQRFLHSPYHHVPIPSSPSGPFIRPHHRRHDHRGAYSFPPTARVPQALSSMIHPHHKDPFNDDDDDDLPRVVGRQNGSGSGGGDGGVGGMAKEKEEPLLEVVQNIDDDDVDVDLNLSLAHHIIPSTSKHNNINYKE* 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g1107 235 MobiDBLite consensus disorder prediction 1 40 - -
Aev04g1107 235 ProSiteProfiles Zinc finger C2H2 type domain profile. 48 75 IPR013087 -
Aev04g1107 235 MobiDBLite consensus disorder prediction 154 170 - -
Aev04g1107 235 MobiDBLite consensus disorder prediction 151 190 - -
Aev04g1107 235 MobiDBLite consensus disorder prediction 1 21 - -
Aev04g1107 235 PANTHER ZINC FINGER PROTEIN 6-LIKE 1 218 - -
Aev04g1107 235 SUPERFAMILY beta-beta-alpha zinc fingers 45 75 IPR036236 -
Aev04g1107 235 ProSitePatterns Zinc finger C2H2 type domain signature. 50 70 IPR013087 -
Aev04g1107 235 PANTHER ZINC FINGER PROTEIN 5 1 218 IPR044299 GO:0010090
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g1107 Aev-Chr4 6973664 6974371 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g1107 23 99 C2H2 Transcription Factor Family AT1G67030 45.455 2.46e-13 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g1107 - - aprc:113852247 102.449