Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g1098 ATGGCTTTACAACGAAACTTAACTGGGCAACTTGTGGGTTCTGAGATACATGGCTTCCACACAATGCAGGATCTGGAAATTGAAAACACTTTGGAAGAAGCAAAAAGCAGATGGCTTCGTCCCAATGAGATTCATGCCATACTCTCTAATTACAAATATTTCACGATCCATGTCAAGCCAGCAAATAAGCCCAAAAGTGGTACTATCGTATTATTTGATCGCAAGATGCTTAGGAACTTTCGAAAAGATGGGCACAACTGGAAAAAGAAAAATGACGGCAAAACTGTTAAAGAAGCTCATGAGCACTTAAAAGTTGGTAATGAAGAAAGGATTCACGTATATTATGCACATGGCCAAGACAACCCGAGTTTTGTTCGTAGATGTTATTGGTTGCTTGATAAGAGTCTAGAGCACATAGTCCTTGTTCATTATCGTGAAACACAGGAGTTGCAAGGTTCTCCTGTCACACCAGTGAATTCTCATTCCAATTCTGTCTCTGGTCCAACCACGCCGTGGACTTTATCAGAAGAATTAGATTCTGGGACCAGAACTGCTTATGCTGATGGGCTTAATGACAATTTAACGGTCAAAAGTCATGAAATGAAGCTTCATGAGCTTAATACACTTGAATGGGATGACCTGGTAGTTTCAAATGATAACAGATCTACTATACCCGATGGAGGAAATGTTCAATATTTGAATCAACAAAATCAAGGGTTACTGAATGGAAGCTTTGGCAATGTTGCCAACAATCCTCCTGTTCAAGTTCCTTCTTTTGGTAATTTAGCTCAGCCGATTGCTGTGAGCAATAGTGTTCCTTACATTGTTCCAGACAGTTTCAATCTTCAGAGGAATTCTCAGATCCCTTTGAGTGGTGTTGATTCCTTGGACACTTCGGTTAATCAAGGCTTGCAAAGTCAGGACAGCTTTGGAATGTGGATAAACAACATTATGTCTGATCCACCTTGTTCTGTAGATGAGTCAGCTCTTGAATCCTCTAATTCTTCATCTGTTCATGAATCATATTCATCACAGCTGGTGGGCAATCAGCAATCTTCTCTGCACGGACAAATATTTACTATCACCGATGTGTCCCCGTCATGGGCATCTTCCACTGAGAAAACTAAGATCCTCGTAACTGGATTATTTCATAGTGACTATCAGCACCTTACAAAGTCCAATCTATTCTGTGTCTGCGGTGATGTGAGTATTCCTGTAGAGATTGTTCAGGTCGGGGTCTACCGATGCTGGGTATCACTGCATTCTCCTGGATTTGTGAATCTCTATATGAGCCTCGACGGCCATAAGCCAATTAGTCAAGTTGTTAATTTTGAGTACCGTACTCCAATATTGCATGACCCTACTGCTTATATGGAAGAGAAACACAACTGGGAAGAAATTCGACTTCAGATTAGGCTTGCTCATTTGCTTTTCGATACAAAAAAGAGCCTGGATATTTTCTCTAGTAAAGTATCACCTAATGCACTGAAAGAGGCTAGGAAATTTACCAAAAAAACATCTTTTATGTCCAAAAGTTGGCAATACTTGACGAAGTCGATTGAAGACAGTACAATTCCATTTCCACAAGCAAAAGATGACATGTTTCTAATTGCCTTGAAGAACAGATTAAAGGAATGGCTTTTGGAACGAATTGGCTTAGGCATTAAAACTACTGAATACGATACACAAGGACAAGGTGTAATCCATTTGTGTGCAAATTTGGGATATACTTGGGCTGTTTCTTTATTTTCATGGTCAGGTTTGTCTCTGGATTTCCGTGACAAATTTGGGTGGACAGCTCTTCATTGGGCAGCATATTATGGAAGGGAGAAAATGGTTGCAACACTCTTGTCTTTTGGGGCGAGGCCAAACTTGGTCACAGATCCAACTCCTCAAAACCCTGGTGGATGTACTGCTGCTGATCTTGCTTATATGAAGGGTTTTGATGGTTTAGCGGCTTATCTTTCAGAAAAGTCTGTGGTTGAACAGTTCAATGACATGAGCTTAGCTGGAAACATCAGTGGCAAACTGGAAACAACCTCAACGGATACAGGAAATGCCGAGAACCTCACTGAGGACCAATTGTACCTAAAAGATACATTAGCTGCTTACCGAACCACAGCGGAGGCAGCAGCACGTATCCAAGCTGCATTTAGGGAGCACTCACTAAAATTGCAATCTAAGGCTATTGAGTTCTGCAGTCCAGAGGCTGAAGCACGCCAAATAGTAGCGGCAATGAAGATTCAACATGCCTTCCGCAGTTTTGAGTCAAGGAAAATGATGGCAGCAGCTGCTCGGATCCAACACTCATACCGTACATGGAAGTTACGCAGAGACTTTCTCCATATGCGGCGTCAGGCTACTAAAATTCAAGCTGCTTTTCGGGGCTTTCAAGTGCGGAGGCAGTATCGCAAAATTATTTGGTCTGTTGGAGTGCTTGAGAAAGCAATCCTGCGCTGGCGTTTAAAGAGGAAAGGGTTCCGCGGTCTGCAGGTCAATCCTGTAGAAGAAATGAAAGATGAGAAGCAGGAAAGTGATGCAGAGGAGGACTTCTTTAAGACTAGTAGGAGACAAGCTGAGGAACGCGTTGAGAGGTCGGTAGTACGAGTACAAGCCATGTTCCGCTCTAAGAAAGCACAAGAAGAGTATAGGAGGATGAAGATGGCCCATACTCAAGCAAAGCTTGATCTGGAACTTGAAGAACTCATCAGTTCTGAAGTTGACATGCCACTGAATATATAG 2742 0.422 MALQRNLTGQLVGSEIHGFHTMQDLEIENTLEEAKSRWLRPNEIHAILSNYKYFTIHVKPANKPKSGTIVLFDRKMLRNFRKDGHNWKKKNDGKTVKEAHEHLKVGNEERIHVYYAHGQDNPSFVRRCYWLLDKSLEHIVLVHYRETQELQGSPVTPVNSHSNSVSGPTTPWTLSEELDSGTRTAYADGLNDNLTVKSHEMKLHELNTLEWDDLVVSNDNRSTIPDGGNVQYLNQQNQGLLNGSFGNVANNPPVQVPSFGNLAQPIAVSNSVPYIVPDSFNLQRNSQIPLSGVDSLDTSVNQGLQSQDSFGMWINNIMSDPPCSVDESALESSNSSSVHESYSSQLVGNQQSSLHGQIFTITDVSPSWASSTEKTKILVTGLFHSDYQHLTKSNLFCVCGDVSIPVEIVQVGVYRCWVSLHSPGFVNLYMSLDGHKPISQVVNFEYRTPILHDPTAYMEEKHNWEEIRLQIRLAHLLFDTKKSLDIFSSKVSPNALKEARKFTKKTSFMSKSWQYLTKSIEDSTIPFPQAKDDMFLIALKNRLKEWLLERIGLGIKTTEYDTQGQGVIHLCANLGYTWAVSLFSWSGLSLDFRDKFGWTALHWAAYYGREKMVATLLSFGARPNLVTDPTPQNPGGCTAADLAYMKGFDGLAAYLSEKSVVEQFNDMSLAGNISGKLETTSTDTGNAENLTEDQLYLKDTLAAYRTTAEAAARIQAAFREHSLKLQSKAIEFCSPEAEARQIVAAMKIQHAFRSFESRKMMAAAARIQHSYRTWKLRRDFLHMRRQATKIQAAFRGFQVRRQYRKIIWSVGVLEKAILRWRLKRKGFRGLQVNPVEEMKDEKQESDAEEDFFKTSRRQAEERVERSVVRVQAMFRSKKAQEEYRRMKMAHTQAKLDLELEELISSEVDMPLNI* 914
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g1098 913 Gene3D Immunoglobulins 354 450 IPR013783 -
Aev04g1098 913 Gene3D - 757 807 - -
Aev04g1098 913 SMART iq_5 862 884 IPR000048 GO:0005515
Aev04g1098 913 SMART iq_5 782 804 IPR000048 GO:0005515
Aev04g1098 913 SMART iq_5 759 781 IPR000048 GO:0005515
Aev04g1098 913 MobiDBLite consensus disorder prediction 152 173 - -
Aev04g1098 913 ProSiteProfiles IQ motif profile. 864 892 IPR000048 GO:0005515
Aev04g1098 913 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 705 810 IPR027417 -
Aev04g1098 913 SUPERFAMILY Ankyrin repeat 534 658 IPR036770 -
Aev04g1098 913 SMART ANK_2a 635 666 IPR002110 GO:0005515
Aev04g1098 913 SMART ANK_2a 596 625 IPR002110 GO:0005515
Aev04g1098 913 ProSiteProfiles IQ motif profile. 783 807 IPR000048 GO:0005515
Aev04g1098 913 Pfam CG-1 domain 33 146 IPR005559 GO:0003677
Aev04g1098 913 ProSiteProfiles IQ motif profile. 741 770 IPR000048 GO:0005515
Aev04g1098 913 Pfam Ankyrin repeats (3 copies) 543 625 IPR002110 GO:0005515
Aev04g1098 913 Gene3D - 528 666 IPR036770 -
Aev04g1098 913 Pfam IQ calmodulin-binding motif 785 804 IPR000048 GO:0005515
Aev04g1098 913 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 17 911 - -
Aev04g1098 913 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR 17 911 - -
Aev04g1098 913 SUPERFAMILY E set domains 360 447 IPR014756 -
Aev04g1098 913 SMART CG_1_2 30 148 IPR005559 GO:0003677
Aev04g1098 913 ProSiteProfiles CG-1 DNA-binding domain profile. 27 153 IPR005559 GO:0003677
Aev04g1098 913 ProSiteProfiles Ankyrin repeat profile. 596 628 IPR002110 GO:0005515
Aev04g1098 913 ProSiteProfiles Ankyrin repeat region circular profile. 596 624 - -
Aev04g1098 913 ProSiteProfiles IQ motif profile. 760 789 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g1098 Aev-Chr4 6874011 6880752 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g1098 31 896 CAMTA Transcription Factor Family AT3G16940 55.862 0.0 942
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Aev04g1098 CG-1 7.5e-47 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g1098 K21596 - gmx:100819198 1348.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g1098 04 6874011 6880752 Aev04g1098 04 6874011 6880752 ECH
Aev01g2891 01 31040263 31047449 Aev04g1098 04 6874011 6880752 PCT