Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g1055 ATGGCCTCATCTCTGATCTCAACACTACCCACCACAGACCGCTCACGTGACCTGCACGTGCAGAAGAAAAAGAAGAAACTTCACCACTCAAAGCATCACCAAAACCAAATCCAAATCCAAATCAAATGGAAATCACAAGCGCAGCAGACCCTCTACTCCACCAACCTCCGCCGCGCCCTCGCCGGATCCAACCACTCCGCCGGAAAATCCGTCCGCGAAACCGCCGACAGGGTCCTCGCCGCCGCCGCAAGGGGGAAAACGCGTTGGAGCAGAGCAATACTAACCTGCAACCGCCTCAAACTCAAGTTCAGATCAAAAAGGAGCAAAAGCAAGAGACAGAGAATAACTATCTCATCACCATCTCCGGTCCGGTCCAGAAAAACCCGGTTCAGCGTGTTGGGTCTGAAAGGGAAAACCGTTCCGGCGGTCCAGAGAAAAGCGAGGGTTCTTGGAAGATTGGTACCAGGTTGCAAAAAGGAACCTTTACCGGTGATTCTAGAAGAAGCTATCGATTACATACCCGCTCTTGAGATGCAAGTTCGTGCCATGACGGCGCTCGCCAACTTGTTCTTAGCTTCTTCTTCTTCTTCCGGCGCCGGCGCCGGTGGTGCTCCGGCCAGCTGA 624 0.5353 MASSLISTLPTTDRSRDLHVQKKKKKLHHSKHHQNQIQIQIKWKSQAQQTLYSTNLRRALAGSNHSAGKSVRETADRVLAAAARGKTRWSRAILTCNRLKLKFRSKRSKSKRQRITISSPSPVRSRKTRFSVLGLKGKTVPAVQRKARVLGRLVPGCKKEPLPVILEEAIDYIPALEMQVRAMTALANLFLASSSSSGAGAGGAPAS* 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g1055 207 PANTHER MYC-TYPE, BASIC HELIX-LOOP-HELIX (BHLH) DOMAIN-CONTAINING PROTEIN-RELATED 8 203 - -
Aev04g1055 207 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 148 189 IPR036638 GO:0046983
Aev04g1055 207 MobiDBLite consensus disorder prediction 1 35 - -
Aev04g1055 207 MobiDBLite consensus disorder prediction 19 35 - -
Aev04g1055 207 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 8 203 IPR044660 GO:0006355
Aev04g1055 207 CDD bHLH_AtIBH1_like 132 187 IPR044549 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g1055 Aev-Chr4 6607491 6608114 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g1055 42 186 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G17100 52.727 3.39e-44 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g1055 - - aip:107638969 190.274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g1055 04 6607491 6608114 Aev04g1055 04 6607491 6608114 ECH
Aev01g2857 01 30886271 30886894 Aev04g1055 04 6607491 6608114 PCT