Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g1053 ATGGCATCTTCTGATGAGTCTACAGACATCTCCGACCAAAACCACAACTTAGTAAACTCCCCCAATTCCCAGCCAGACACCACCGTGCCCACCATTTCCGACAGAATACCTCATGATGATCGTCATACAAACTCCTTTGAATTTGATGATTTACTGTCGGAGTGGTTGTCTGGGGACAGTAACAACGAAAATGATGTTGTTGCCACCGATGAGACTCCGGTAGTGAGCCACCCTCTTCCACCACCAGTACTGTCGAGTTCAATTCTTCCAGAACCTTCAGAAGCAGCGCCTCCCAAAGTGGTTGTATCCCAAGCGGAGAAAGCAGGGGAGAGACATGAAGCTACGTGTTTAGATGGTCTGAGTGTAGTTGGAGGTGAAGGCGGAGACGGAGGCGAAAACAAGGCTGAAATTGGCGGAGATGACCGCCGAGAAAAAGACAAAAGTATATTAAAGGTAAACCGAAGAAAGACGAAAGAGGAAAGATTTTCTTTTATTACAGAGAGCGATGTGGAAAACCTTGACGATGGCTATAAATGGCGCAAGTATGGCCAAAAAATGGTGAAGAATAGCCCTTACCCTAGGAGCTATTATCGGTGCACACAGACGGGATGTGGAGTGAAGAAGCATGTTGAGAGATACGCTGGCAACGCCGCACAAGTGGTGACCACCTACGAGGGTCAGCACAACCACCCCTCCCCCCTTCCCTCTTCTCCTACGCATGCTCGCCGCAGAAACACTACCTTCTTCCTCAGCGCCATCAGTGATGATGTGGATGCAACTGCCACTGATGATGCTGCTCTTGTTCCTCCCAATTTCAATGCCACCGGAACTAGTCCTCATCCTCATGCTGATGCTGCTTACACTCATTTTGACGGATGTGTTGACGCTTCCAATTATGGTGCTGGTGCTACCTCTGTTGGTTTTGAATTAGATGGTGGTGGCAGCATCAATGGTTTTGGTTTTGGTGGGTTATACGGCGGTGACGGCAACGGCAATGAGTTTGGTTTTGGGTCAGAGGCAGCGATGCAGGGTAATATGGAAGTGCAGGAGGAGGAGCAGAACAACATTATTGATTTGGAAGGAGCAGGAAACAGATTCTTCTACAACAACTTCAGCCCCTTGCTTCCAATAAGTGCTGCCAGTTTTGTTAATCTTAACAACAACAGCACTCAGATCATGATGAACCAGGTGTCTCATCAGAGTACCACTCAGGCAGTGCTTCCTCCATTTCCTGATCATGTCAATGATAATGGTGTTGGTGCTGCCAATTTCCATTTGGGTCGGTTTTGTTCTACTATGGCTATCCCATCTACTAATCCTAATGAGGATTTCATGATCATGGACACTGGTCTCCTTCAGGACATGTTTATCAAGCCAGTGCACAAGAACAATAACAATTGA 1401 0.4732 MASSDESTDISDQNHNLVNSPNSQPDTTVPTISDRIPHDDRHTNSFEFDDLLSEWLSGDSNNENDVVATDETPVVSHPLPPPVLSSSILPEPSEAAPPKVVVSQAEKAGERHEATCLDGLSVVGGEGGDGGENKAEIGGDDRREKDKSILKVNRRKTKEERFSFITESDVENLDDGYKWRKYGQKMVKNSPYPRSYYRCTQTGCGVKKHVERYAGNAAQVVTTYEGQHNHPSPLPSSPTHARRRNTTFFLSAISDDVDATATDDAALVPPNFNATGTSPHPHADAAYTHFDGCVDASNYGAGATSVGFELDGGGSINGFGFGGLYGGDGNGNEFGFGSEAAMQGNMEVQEEEQNNIIDLEGAGNRFFYNNFSPLLPISAASFVNLNNNSTQIMMNQVSHQSTTQAVLPPFPDHVNDNGVGAANFHLGRFCSTMAIPSTNPNEDFMIMDTGLLQDMFIKPVHKNNNN* 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g1053 466 SUPERFAMILY WRKY DNA-binding domain 166 233 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aev04g1053 466 Gene3D WRKY domain 158 234 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aev04g1053 466 MobiDBLite consensus disorder prediction 33 48 - -
Aev04g1053 466 MobiDBLite consensus disorder prediction 133 150 - -
Aev04g1053 466 ProSiteProfiles WRKY domain profile. 168 233 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aev04g1053 466 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 44 251 IPR044810 GO:0003700
Aev04g1053 466 MobiDBLite consensus disorder prediction 1 78 - -
Aev04g1053 466 MobiDBLite consensus disorder prediction 1 31 - -
Aev04g1053 466 MobiDBLite consensus disorder prediction 55 69 - -
Aev04g1053 466 MobiDBLite consensus disorder prediction 120 150 - -
Aev04g1053 466 Pfam WRKY DNA -binding domain 174 231 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aev04g1053 466 SMART WRKY_cls 173 232 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aev04g1053 466 PANTHER WRKY TRANSCRIPTION FACTOR 48-RELATED 44 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g1053 Aev-Chr4 6592205 6594555 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g1053 158 234 WRKY Transcription Factor Family AT5G49520 70.130 1.03e-34 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aev04g1053 WRKY 7.1e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g1053 - - mtr:MTR_2g033820 158.303
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g1053 04 6592205 6594555 Aev04g1053 04 6592205 6594555 ECH
Aev04g1053 04 6592205 6594555 Aev01g2855 01 30848528 30850383 PCT