Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g1035 ATGGATGTGAAAGCAAGAGTAAACAACAACAACACCATCAACACCGACACCATTCAAGACGATGACATGGACCTCCGAAGAGGTCCATGGACCGTCGATGAGGATCTTGCACTCATTAATTACATTGCCACTCACGGCGAAGGTCGTTGGAACTCCCTTGCTCGCTCTGCTGGACTCAAACGAACCGGCAAGAGCTGTAGATTGAGATGGTTGAATTATCTACGGCCAGATGTTCGTCGTGGTAACATAACACTTGAAGAACAACTTCTTATTCTTGAGCTTCATGCTCGTTGGGGAAACCGGTGGTCCAAAATTGCTCAATATTTGCCTGGTAGGACCGATAATGAGATCAAGAACTATTGGAGAACTCGTGTCCAAAAGCATGCCAAACAATTGAAATGTGACGTGAATAGCAAGCAGTTCAAGGACACCATGCGCTACCTTTGGATGCCAAGGTTAGTAGAGCGCATTCAAGCCGCCGCGGCCGCAACGACCGCCACAACCACCGCCGTCACCGCCGCCACAACATACAACCTTAACAACAACAACAACAATTTTGAGGTTCATAGTGGGAACACGATGCTAGGATCCACCCAAACAATCATTCACAGCAACAACTTTGGGACTAGCAATTCAAATGTGACACAAAGTAATTATGCTACTCCGGAGAATAGTAGCACAGGCACAGTGGGATCATCGGACTCATTTGGTACACATGATAATTATTACTCTACACCTAGTACTGTTGGTAACAACAACGATAATCCTAATTATCCTAATCAGGATTATTACCATCAAGATAATCACCAATTAAGCTTTAATTTGGATTGCATCACTAGTCCATCCATGATGTTCCCTCAAGATCAGATGGATTTCCAAGCCATGGAGTTACCAAACACCCCTAATTATTGGATTAATCAGAGTACTAATACTTCTTCTTCCAACAATTTCTGGAATGATGACAACATGTTCTTACAACATCTTATTAGTGGTGACAACATGTGA 1005 0.4348 MDVKARVNNNNTINTDTIQDDDMDLRRGPWTVDEDLALINYIATHGEGRWNSLARSAGLKRTGKSCRLRWLNYLRPDVRRGNITLEEQLLILELHARWGNRWSKIAQYLPGRTDNEIKNYWRTRVQKHAKQLKCDVNSKQFKDTMRYLWMPRLVERIQAAAAATTATTTAVTAATTYNLNNNNNNFEVHSGNTMLGSTQTIIHSNNFGTSNSNVTQSNYATPENSSTGTVGSSDSFGTHDNYYSTPSTVGNNNDNPNYPNQDYYHQDNHQLSFNLDCITSPSMMFPQDQMDFQAMELPNTPNYWINQSTNTSSSNNFWNDDNMFLQHLISGDNM* 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g1035 334 SMART sant 26 76 IPR001005 -
Aev04g1035 334 SMART sant 79 127 IPR001005 -
Aev04g1035 334 MobiDBLite consensus disorder prediction 207 261 - -
Aev04g1035 334 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 79 129 IPR017930 -
Aev04g1035 334 Pfam Myb-like DNA-binding domain 27 74 IPR001005 -
Aev04g1035 334 Pfam Myb-like DNA-binding domain 80 123 IPR001005 -
Aev04g1035 334 ProSiteProfiles Myb-like domain profile. 75 125 IPR001005 -
Aev04g1035 334 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 22 78 IPR017930 -
Aev04g1035 334 SUPERFAMILY Homeodomain-like 24 121 IPR009057 -
Aev04g1035 334 PANTHER MYB TRANSCRIPTION FACTOR 1 327 - -
Aev04g1035 334 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 1 327 IPR044676 GO:0003700|GO:0006355|GO:0043565
Aev04g1035 334 Gene3D - 24 80 - -
Aev04g1035 334 Gene3D - 84 147 - -
Aev04g1035 334 CDD SANT 29 74 IPR001005 -
Aev04g1035 334 ProSiteProfiles Myb-like domain profile. 22 74 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g1035 Aev-Chr4 6442319 6444373 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g1035 1 319 MYB Transcription Factor Family AT3G06490 52.553 3.25e-90 271
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Aev04g1035 Myb_DNA-binding 6.6e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g1035 K09422 - gmx:100805341 370.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g1035 04 6442319 6444373 Aev04g1035 04 6442319 6444373 ECH