Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g1029 ATGATTGTGAGCCAGAAGATGGTGGCGGAAGCGGAAATCATGTGTCAGCAGAGCATTCCGGTGTTGGATGTGAAGTATCACCTCTGCGTAGCACAGCAACACAACGTCAAGGTCGAGGTTTCTCCCAAGGCGAACGCTGTCCCGATCTTTAGCCAAGTGAAGGTCTCGCCTGAATCGATTTCCACCGAAACTCCTCGCTTTGAATCGGTTGTGGGTTGTTCTGAGATAATTGAAGATTCCATTTTGGAAGCCCCTTCTACCACATTTACTCCAAATATTCGTTCCGGTAGCTGTGCTGATATTGGACCCAGAAGATCTATGGATGATGAACACATTCAGATAGATGATCTAGCTGCCCATCTTGGATTTGTGTTCAAGTCCCCTATGCCAAGTGCGTTTTATGCAGTTTTTGATGGGCATGGAGGGCCTGATGCAGCTGCTTTTGTCAAGAATAATGCAATGAGACTGTTTTTTGAAGATGCGGATATGCTTCAATCTAATGATGTTGATGCTCCTTTTCTGAAGAGGTTGGAGGATTCTCACAGAAGAGCTTTCTTAGGGGCAGACCTTGCTTTGTCTGAGGAGCAAAGTGTGAGTAGTTCTTGTGGTACAACAGCACTGACGGCCCTTATACTTGGAAGACATTTGATGGTTGCCAATGCTGGCGATTGTAGAGCCGTGCTTTGCAGGCGAGGTGCAGCAGTTGAGATGTCCCATGATCATAGACCGAGCTATTTACCAGAACGGAAGAGAGTTGAGGAGGCAGGCGGTTTCATTGATGATGGGTATCTCAACGGCTATCTTTCTGTCACTCGTGCCCTTGGTGATTGGGACTTAAAACTTCCACTTGGTTCTGCATCGCCTCTTATTGCTGACCCTGATGTTCAAGTGGCTACATTGACAGATGAGCACGAGTTCTTAATCATTGGGTGTGACGGTATCTGGGATGTTATGTCGAGCCAGGATGCAGTTAGTTTTGTGCGTCGGAGATTGAGAAGGCATGATGATCCACAACAATGTGCCAGAGAACTAGTCAAGGAGGCATTGCGCCGAAACACATCAGATAATCTTACTGTGATTGTTATATGCTTGTCCACAGTGGAAAAGATTGTTGAATCTTGCCCACCCCATATGCGAAGATTCAGAGCCTGA 1152 0.4661 MIVSQKMVAEAEIMCQQSIPVLDVKYHLCVAQQHNVKVEVSPKANAVPIFSQVKVSPESISTETPRFESVVGCSEIIEDSILEAPSTTFTPNIRSGSCADIGPRRSMDDEHIQIDDLAAHLGFVFKSPMPSAFYAVFDGHGGPDAAAFVKNNAMRLFFEDADMLQSNDVDAPFLKRLEDSHRRAFLGADLALSEEQSVSSSCGTTALTALILGRHLMVANAGDCRAVLCRRGAAVEMSHDHRPSYLPERKRVEEAGGFIDDGYLNGYLSVTRALGDWDLKLPLGSASPLIADPDVQVATLTDEHEFLIIGCDGIWDVMSSQDAVSFVRRRLRRHDDPQQCARELVKEALRRNTSDNLTVIVICLSTVEKIVESCPPHMRRFRA* 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g1029 383 Pfam Protein phosphatase 2C 99 356 IPR001932 -
Aev04g1029 383 PANTHER PROTEIN PHOSPHATASE 2C 7 52 IPR015655 GO:0004722|GO:0006470
Aev04g1029 383 PANTHER PROTEIN PHOSPHATASE 2C 52 381 IPR015655 GO:0004722|GO:0006470
Aev04g1029 383 SUPERFAMILY PP2C-like 88 365 IPR036457 -
Aev04g1029 383 ProSitePatterns PPM-type phosphatase domain signature. 133 141 IPR000222 GO:0043169
Aev04g1029 383 Gene3D - 81 370 IPR036457 -
Aev04g1029 383 PANTHER PROTEIN PHOSPHATASE 2C-LIKE PROTEIN 7 52 - -
Aev04g1029 383 PANTHER PROTEIN PHOSPHATASE 2C-LIKE PROTEIN 52 381 - -
Aev04g1029 383 CDD PP2Cc 93 364 IPR001932 -
Aev04g1029 383 ProSiteProfiles PPM-type phosphatase domain profile. 94 364 IPR001932 -
Aev04g1029 383 SMART PP2C_SIG_2 109 364 IPR001932 -
Aev04g1029 383 SMART PP2C_4 84 362 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g1029 Aev-Chr4 6362398 6364076 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g1029 1 382 PP2C-type Phosphatase Gene Family AT1G48040 56.888 2.68e-139 400
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBP Aev04g1029 PP2C 9.6e-67 CL0238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g1029 K14803 - gmx:100798957 651.358