Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g1007 ATGGAAGTGGCCAAAAATACTCCAAGCCATAGCCGAAAGCGTAGTAGAAGGGAATGTGATGGCATTAGATTGGAAGAGTTATTGGTACCAGAACAAGAAGAAGAAGAAAAACAAGTTTCTGATGGTGGCTCCAAACAAGTTAGGCCTATTACTGTTAGCCTTTCAGACCCAGATGTCCTCACTTGCTCCATATGCTTTGACTCATTGACTATTCCACTCTATGAGTGTGATGATGGCCATATTGCTTGCTCTGCATGCTGTATCATTCATGACAAAAAATGTATCACATGCCCATCGCCCTTAAATCGTAGCAGAGCCTTAGAGAAAATACTGCAATCTATAAAAGTACCATGTCCTAATTCCAAATATGGTTGCAAGGAAACATTATGTTACAATTTGAAGAACAGCCATGAGCCTAATTGCATCTATGCACCATGTTCATGCCCACATTCAAACTGTAACTTTGTTGCCTCATCCAAGGAATTATCCCTTCATTTCAGTGACAAACATGGAAATTCTGCTGTGAAATTCACATATGACAAATCTTTTTATGTTACATTGAAGCCTAATAATGATGGGACCATTATTCTTCAAGAGGAAACTCAGGGCACATTGTTTATTCTGCATAACAATGTGGTGAGTAGTGTGGGGAATGTAGTGAATATAAGTTGGATTGGGCCTAAATCCTCTTCCAACACTCGGTTTCAGTATATTATTTGGCCTAGGATTGGGGAATATCATATGGCCTTTTTGAGTTTTGCTAAGAACATTCAATGTGAATCTACTACTATAGCTACTCTTTCATCAACGTCCCTTGTGCTTCCATTTAATTTCTTTGGTTGCTCTGAACCTTTGAAACTGGAAATTGAGATAATAGTGGATTTACTAGCTGAAGATATTATGCAATGA 909 0.3839 MEVAKNTPSHSRKRSRRECDGIRLEELLVPEQEEEEKQVSDGGSKQVRPITVSLSDPDVLTCSICFDSLTIPLYECDDGHIACSACCIIHDKKCITCPSPLNRSRALEKILQSIKVPCPNSKYGCKETLCYNLKNSHEPNCIYAPCSCPHSNCNFVASSKELSLHFSDKHGNSAVKFTYDKSFYVTLKPNNDGTIILQEETQGTLFILHNNVVSSVGNVVNISWIGPKSSSNTRFQYIIWPRIGEYHMAFLSFAKNIQCESTTIATLSSTSLVLPFNFFGCSEPLKLEIEIIVDLLAEDIMQ* 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g1007 302 ProSiteProfiles Zinc finger SIAH-type profile. 113 171 IPR013010 GO:0008270
Aev04g1007 302 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 108 166 IPR013083 -
Aev04g1007 302 PANTHER E3 UBIQUITIN-PROTEIN LIGASE SINA-LIKE 4 31 291 - -
Aev04g1007 302 Pfam Seven in absentia protein family 104 240 IPR018121 GO:0005737|GO:0006511|GO:0007275
Aev04g1007 302 SUPERFAMILY TRAF domain-like 113 280 - -
Aev04g1007 302 PANTHER E3 UBIQUITIN-PROTEIN LIGASE SINA-LIKE 4 31 291 IPR044286 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g1007 Aev-Chr4 6207327 6208567 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g1007 34 170 C3H Transcription Factor Family AT2G41980 30.496 9.52e-15 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g1007 K04506 - gmx:100797881 232.646