Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g0996 ATGACTCTGCAATTTTTGGCATCTCATCACATAATCATCATCATTTTATTGCATCCATTACTATTAGCATCAGCACAAGAATATAGTCTAGCAAAACCTGGGTGTAATTCCACATGTGGAGATATTACGATCCCTTACCCATTTGGGATGAAAGATCCCAAATGCTACCTACACGAATGGTTCGAGATAGATTGCAGAAGAAACATCAGTACTACTAGTACTAATACTTATTACAAGCCTTACCTCAAATCCTTGAATCTTGAGGTCACAGATATTAACCAGAACGAAGGGCAGGTTGAAATAATGAACCCAATTTACCGTTGGAACTGCCAAAGCAAAAACGCAAGGCCAGTCATAAACATGAGAGGAAGCCCTTACGTGTATTCCAAGGAAGGTAACAAGTTCGTGGCCGTTGGTTGTAACAAACTTGCATTTCTAAGGTCCAATGGGTCAACGGTGAGTGGATGTGTGTCCATTTGTGATGATGACGAGGCTGCTCACGACGACAACATTGCCTACGGACCCGACGGTTGTGTTGGAAGGTATTGTTGCGAGACTTCGCTCCCTATACATCTGGCAGAGTACAACGCCACGATCCAAGATCTGATGAATAACCAAAGTGTGAGGAGTGAGGGGTGTAGCTATGAACTAATTGTTGATGAAGATTGGCTTCAGGATCAGTACCGTGGCTACTATTTGGGATCCACTTGGAGTTTAAGTGACCTAAACAACCTGGATTATGTTCCAGCGGTGCTTGAGTGGGAGATTCCCAACTATATGTTGACCAATAATAATAATTCAACCTTGGAGCTCTCTTCGGATGCTCACACCTTTTGCACTGACACTAACATAACATCTGCACAGAACACAACCTCAGGTCGGAGATGTCGATGCCTCACTGGAAACACAGGCACTGGCTACATCAAAGGGAGCTGCGCAGCTATACCAGGATTCTACCATGAGAAAAGTAAATCGAAGTGGGCTATAGTAGGAGTTTCATCTGGCCTAGGATCCATCATTTTACTTATTGGTGTATGGTTTTCGTACAAAGTTGTGAAGAAAAGATTGGTGAGAAAACGGAAAGTAAAATTCTTCAAAAAAAATGGTGGGTTGATGTTACAACAACGATTATCCTCTGGTGAAGCAAAAGTTGACAAAGGTATTCACTTCAGCTTAAAGGACTTAGAAAAAGCCACTGACAACTTCAACCAGAACAGAGTTCTTGGCAAAGGGGGTCAAGGTACAGTTTACAAAGGGATGCTAGCAGATGGTAAAATTGTTGCAGTGAAAAAGTTTAAAGTCCAAGGAAATGCCGAAGAATTCATCAACGAATTCGTCATTCTTTCGCAGATCAACCATAGAAATATTGTCAAGTTGTTAGGATGTTGTTTGGAAACAGAAATCCCTCTGCTTGTTTATGAGTTCATTCCTAATGGCAACCTTTTCGAGTATTTACATGATCAGAGTGAGGATTTACCTATGACATGGGATATGCGTTTGAGAATGGCAACAGAAATTGCAGGAGCTCTGTTTTACCTACACTCTGTTGCATCTCAACCAATCTATCATAGGGACATCAAATCAACAAATATACTATTGGATGAAAAGTACAGAGCAAAAGTTGCTGATTTTGGAACTTCTAGAATAGTTTCTATTGAAGCTACTCATCTTACAACAGCAGTTCAAGGCACTTTTGGATACTTGGACCCGGAATATTTTCATACTAGTCAGTTTACAGAGAAGAGTGATGTTTATAGCTTCGGCGTAGTTCTTGTGGAGCTTTTAACAGGAGAAAAACCAATATCATCTATAAGGCCAGAGGAAGCTAAGAGCTTAGCTTCATATTTTGTTGTGTGTGTGGAAGAGAACCGTTTGTTTGACATTATTGACAAAAGGGTCATGGAAGAAGGGGAGAAAGAACATATCATTGCAATGGCGAATCTTGCATATAGATGCTTAGAGTTGAATGGGAGAAAAAGACCAACAATGAAAGAAGTTACATTGGAATTAGAAGGGATAAGAAGATTGGATCAGAAGAACAATGATGTACAACAAAGTCATGAAGAAATTGAGATTTCTAGAATTGAAGACTACCAACTTTGGATTGGATGTGATACATCAGATACACTACCAACTACATCCAGCAATGGCCTCTCCTCAAGAGGTTATGCCTATTCTCACAATAGTGTAGGGCTTTAA 2199 0.4038 MTLQFLASHHIIIIILLHPLLLASAQEYSLAKPGCNSTCGDITIPYPFGMKDPKCYLHEWFEIDCRRNISTTSTNTYYKPYLKSLNLEVTDINQNEGQVEIMNPIYRWNCQSKNARPVINMRGSPYVYSKEGNKFVAVGCNKLAFLRSNGSTVSGCVSICDDDEAAHDDNIAYGPDGCVGRYCCETSLPIHLAEYNATIQDLMNNQSVRSEGCSYELIVDEDWLQDQYRGYYLGSTWSLSDLNNLDYVPAVLEWEIPNYMLTNNNNSTLELSSDAHTFCTDTNITSAQNTTSGRRCRCLTGNTGTGYIKGSCAAIPGFYHEKSKSKWAIVGVSSGLGSIILLIGVWFSYKVVKKRLVRKRKVKFFKKNGGLMLQQRLSSGEAKVDKGIHFSLKDLEKATDNFNQNRVLGKGGQGTVYKGMLADGKIVAVKKFKVQGNAEEFINEFVILSQINHRNIVKLLGCCLETEIPLLVYEFIPNGNLFEYLHDQSEDLPMTWDMRLRMATEIAGALFYLHSVASQPIYHRDIKSTNILLDEKYRAKVADFGTSRIVSIEATHLTTAVQGTFGYLDPEYFHTSQFTEKSDVYSFGVVLVELLTGEKPISSIRPEEAKSLASYFVVCVEENRLFDIIDKRVMEEGEKEHIIAMANLAYRCLELNGRKRPTMKEVTLELEGIRRLDQKNNDVQQSHEEIEISRIEDYQLWIGCDTSDTLPTTSSNGLSSRGYAYSHNSVGL* 733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g0996 732 CDD STKc_IRAK 408 673 - -
Aev04g0996 732 Gene3D Transferase(Phosphotransferase) domain 1 476 699 - -
Aev04g0996 732 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 16 715 IPR045274 GO:0007166
Aev04g0996 732 ProSitePatterns Serine/Threonine protein kinases active-site signature. 521 533 IPR008271 GO:0004672|GO:0006468
Aev04g0996 732 Coils Coil 673 693 - -
Aev04g0996 732 PANTHER WALL ASSOCIATED KINASE-LIKE PROTEIN 16 715 - -
Aev04g0996 732 ProSiteProfiles Protein kinase domain profile. 402 673 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev04g0996 732 SMART serkin_6 402 673 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev04g0996 732 Pfam Wall-associated receptor kinase galacturonan-binding 35 101 IPR025287 GO:0030247
Aev04g0996 732 Gene3D Phosphorylase Kinase; domain 1 368 475 - -
Aev04g0996 732 Pfam Protein kinase domain 402 666 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev04g0996 732 SUPERFAMILY Protein kinase-like (PK-like) 387 674 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g0996 Aev-Chr4 6147475 6150268 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g0996 35 674 Receptor kinase-like Gene Family AT1G16130 44.200 1.26e-180 532
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Aev04g0996 Pkinase 7.8e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g0996 - - gmx:100798794 906.746