Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g0981 ATGGAAGTGAGTCATGGAGCTGGCAGTGGATCTGGTGGAGATGAAGGAGAAAATCAAAATCGTCAATCGGAAGATGGAAGAAGATTCTACAATCGACATGCTCCTAACCAAACATCTAGACTTGAACAGTTATTCAATATTGATCCCCAGCCAGATGAAGTCCAAAGACAATTAATAGCCCAGCAGCTTGGGATGTCGCCGAATCAAATCAAGTTTTGGTTCCAAAACAGGAGGACCCAACAGAAGAGTCGAACAAAGCGAGAAGATAACAATGCACTTCGGGCTGAGAACGAAAGGATGAAGAGTGAGATGATTGGACTCAAAGAGACACTGAAGAGTAGTGCTTTACTATGCCAAACTTGCGGGGGTCCTGTGGTTATGGATGTAGACCGTCTACATTCTATGGTTCAGCTTCAAGTAGAAAACCAGCGCATTAAACATGAGCTTGAGAGGGCATATAAGCAACTTCCATGGCACAATAAGGAGATAAACAGCTACCCATGGCCATTGTCATCATCAGCAGGACCAGAGTTGCAACTAGGTCCTCCTTCTTTAGAGAATTCCTATGATGCACTCCCAAACACAGCACTACCCTTGCCAATTACTACTACTAATACTACTTCTGATGAGAATCAAGGTTTGGTGAATTATTTAGGAGGAGGTGAAATTCCAGAAGTGCCCAAATCAGCAAAGGAGAAGAGGGCAGAGAGTCATAGGGCAGTAATGTATGAGGCTGTGGTAGGTGCAAAGGAGGAATTGTTTAGGCTCTTGTTCACAGCAGAGCGGCACTTGTGGGTCCACTCTCCAACTAATAGCAACACACAAGTTATTAACCCTTTCAACTATCACAACATGTTTCCTAGGGCTACTAGTCACTTCAGTACCCCAACAGCTAGGGTTGAGTCATCAAAGGATTCAAGAATTGTGAACATTAGGGCATTGCAATTGGTTAAGATGCTTATGGATCAGGAGATGTGGGGTAATGTTTTCTCAACAATGATTTCAAAAGCACTCACACTTGAAGTGGTCGACAAGGGTTTGGAAAGCAACAGAGATGGAGCTTTGCAGCTGTTGTATGAAGAGATGCACATTCTATCACCACTGGTGCCACCTCGAGAGTTCTTCATCCTACGGTATTGTCAAAAGGTGGAAGAAAATGGATGGATTATAGGAGACGTGTCGTTTGACGACTACGACAAGAAAGGGACTACTACTGCTACTACTTCTACCCTTGTTGGTGATGCCTTACGTGCTTGGAAGCGTCCCTCTGGACTCTTCATTCAAGCATTGCCTGATGGCACCTCCCGGGTCACGTGGGTTGAGCACGTGGAAGTGGACGATGAGACGCTACTGCCCCGGCTGTATAGAGATGTGATTAGAAGCGGTGTTGGATATGGAGCACAAAGATGGCTCATGGAACTCCAAAGAATGACTCAAAAATTTAACTGCATCTCATCTTCACCCCTCTTCACTACCATTGACTTTAACATTCCTCCTTCTGCTGCTGCACCTACAGCGATGACAATGCTACCTGAAGGAAGGAAGAATCTGATGAGGATTGCTCAGAGGATGGTATCGAGCTTCTGTGGGAGCCTGAACGTATCAAGTAAGCTGGAGGACCCAAGAAAAGCATCAGTACCAAGTGAAGAAGAAGGCATCAATGGTAATAATATAATGAGCGGGAGTATTAGGGTGTCGGTTCGCGAGAACAGTGAAAGGAGCAATGGCCACCCAATTGGCACAATTGCTGTTGCTGCTATCTCACTCTGGCTCCCTCTTCCTTCTCAGCAGCTTTTTAACTTCTTCAGAGATGCCACTAATCGTATCCAGTGGGATGCTCTTACTGGTGGACAGCCAATGCACGAGGTTGCGAGTTTCTCAACCGCCGGAACTCATCTCGGCAACTCTGTATCAGTTCTCCGGAGTAAGAAGAGTGATGGAGGAAATCCAGGGCTAATAATCCAAGAGAGCTTCACAAACCCTTATGGATCATACATAGTGTTCACCCCACTCAGCGTGGCGGACTTCACAGCCGGAATCGACGGCAGAGGAACCCGAACGGTGGCGCTGCTTCCTTCAGGAATCACCATCTCTGAAGACGGAAAGCACTACTACTCCTCCTCCTCCTCCTCAAATAATGGCGCATCATCCTCATCCTCATCCTCCAGCAGCAGCGGAGCTAGAGGTTCAATCTTGACCCTTTCTTACCAGCTTCTAGTGGATAGCAATAGCAATAATGCCGCCAATGATGATGATGATCATGGCTATGGCTATGGTGGAGTGAAAATTGAAAGTGTGGATGCTGCTAATTCACTCTTGGCCACTGTGGTTGAGCACATCAAGGTTGCTCTCAATTGTCCCCTTGTCGAGTTTAATTGA 2379 0.4628 MEVSHGAGSGSGGDEGENQNRQSEDGRRFYNRHAPNQTSRLEQLFNIDPQPDEVQRQLIAQQLGMSPNQIKFWFQNRRTQQKSRTKREDNNALRAENERMKSEMIGLKETLKSSALLCQTCGGPVVMDVDRLHSMVQLQVENQRIKHELERAYKQLPWHNKEINSYPWPLSSSAGPELQLGPPSLENSYDALPNTALPLPITTTNTTSDENQGLVNYLGGGEIPEVPKSAKEKRAESHRAVMYEAVVGAKEELFRLLFTAERHLWVHSPTNSNTQVINPFNYHNMFPRATSHFSTPTARVESSKDSRIVNIRALQLVKMLMDQEMWGNVFSTMISKALTLEVVDKGLESNRDGALQLLYEEMHILSPLVPPREFFILRYCQKVEENGWIIGDVSFDDYDKKGTTTATTSTLVGDALRAWKRPSGLFIQALPDGTSRVTWVEHVEVDDETLLPRLYRDVIRSGVGYGAQRWLMELQRMTQKFNCISSSPLFTTIDFNIPPSAAAPTAMTMLPEGRKNLMRIAQRMVSSFCGSLNVSSKLEDPRKASVPSEEEGINGNNIMSGSIRVSVRENSERSNGHPIGTIAVAAISLWLPLPSQQLFNFFRDATNRIQWDALTGGQPMHEVASFSTAGTHLGNSVSVLRSKKSDGGNPGLIIQESFTNPYGSYIVFTPLSVADFTAGIDGRGTRTVALLPSGITISEDGKHYYSSSSSSNNGASSSSSSSSSSGARGSILTLSYQLLVDSNSNNAANDDDDHGYGYGGVKIESVDAANSLLATVVEHIKVALNCPLVEFN* 793
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g0981 792 MobiDBLite consensus disorder prediction 706 726 - -
Aev04g0981 792 Gene3D - 11 91 - -
Aev04g0981 792 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HDG10-RELATED 20 786 - -
Aev04g0981 792 Pfam Homeodomain 28 82 IPR001356 GO:0003677
Aev04g0981 792 ProSiteProfiles 'Homeobox' domain profile. 24 84 IPR001356 GO:0003677
Aev04g0981 792 ProSiteProfiles START domain profile. 257 483 IPR002913 GO:0008289
Aev04g0981 792 Pfam START domain 254 480 IPR002913 GO:0008289
Aev04g0981 792 CDD homeodomain 27 82 IPR001356 GO:0003677
Aev04g0981 792 CDD START_ArGLABRA2_like 239 477 - -
Aev04g0981 792 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 20 786 IPR042160 -
Aev04g0981 792 Coils Coil 83 110 - -
Aev04g0981 792 SUPERFAMILY Homeodomain-like 13 84 IPR009057 -
Aev04g0981 792 Coils Coil 135 155 - -
Aev04g0981 792 Gene3D - 283 479 IPR023393 -
Aev04g0981 792 SMART START_1 244 480 IPR002913 GO:0008289
Aev04g0981 792 MobiDBLite consensus disorder prediction 1 36 - -
Aev04g0981 792 SMART HOX_1 26 88 IPR001356 GO:0003677
Aev04g0981 792 ProSitePatterns 'Homeobox' domain signature. 59 82 IPR017970 GO:0000981|GO:0006355
Aev04g0981 792 SUPERFAMILY Bet v1-like 265 482 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g0981 Aev-Chr4 6040746 6046238 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g0981 22 787 Homeobox Transcription Factor Family AT1G73360 35.249 8.83e-140 428
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Aev04g0981 START 1.1e-26 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g0981 K09338 - rcu:8266520 496.508