Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g0964 ATGACTTCTACCCATGATGTCACAGATAATGAAGCGGATGAGCAGCAGCAGACAGAATCAGAGATGCAATCTTTATCTGCAAACGGAATTTCTCATCCAAGTACCGGTATGCAGAATGTTCAGTATGCGACCCCTCCGTCACTTGGAACTACACCTGCTATGGCACCACCTGCTTACCCATATCCGGATCCATACTACAGAAGCATCTTTGCTCCATACGATACACAACCTTATCCCCCGCAACCGTACGGTGGGCAGCCAATGGTTCACCTTCAGTTAATGGGAATTCAACAAGCTGGTGTTCCTTTGCCGACTGACGCAGTTGATGAGCCTGTGTTTGTCAATGCAAAACAGTATCATGGGATATTAAGACGTAGGCAGTCCCGTGCTAAAGCCGAATCAGAAAATAAAGCTATGAGGAATCGTAAGCCTTACCTACACGAATCTCGACATTTGCATGCACTGAGAAGAGCAAGAGGATGTGGAGGCAGGTTTCTAAATTCAAAGAAAAATGAGAATCAGCAGAATGAGGAGCCATCTACCGACAAATCACAGTCTAACGACAATCTCAGTTCTGATAAAAATGATCTCGTGCCGTCAGATAAATCATCCTAA 615 0.4504 MTSTHDVTDNEADEQQQTESEMQSLSANGISHPSTGMQNVQYATPPSLGTTPAMAPPAYPYPDPYYRSIFAPYDTQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVDEPVFVNAKQYHGILRRRQSRAKAESENKAMRNRKPYLHESRHLHALRRARGCGGRFLNSKKNENQQNEEPSTDKSQSNDNLSSDKNDLVPSDKSS* 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g0964 204 ProSiteProfiles NF-YA/HAP2 family profile. 108 168 IPR001289 GO:0003700|GO:0006355
Aev04g0964 204 Gene3D - 108 169 - -
Aev04g0964 204 ProSitePatterns NF-YA/HAP2 subunit signature. 113 133 IPR018362 GO:0003677|GO:0016602
Aev04g0964 204 PANTHER TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED 2 186 IPR001289 GO:0003700|GO:0006355
Aev04g0964 204 PRINTS CCAAT-binding transcription factor subunit B signature 111 133 IPR001289 GO:0003700|GO:0006355
Aev04g0964 204 PRINTS CCAAT-binding transcription factor subunit B signature 142 165 IPR001289 GO:0003700|GO:0006355
Aev04g0964 204 MobiDBLite consensus disorder prediction 167 198 - -
Aev04g0964 204 MobiDBLite consensus disorder prediction 160 204 - -
Aev04g0964 204 MobiDBLite consensus disorder prediction 1 56 - -
Aev04g0964 204 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT A-7 2 186 - -
Aev04g0964 204 SMART cbf3 107 168 IPR001289 GO:0003700|GO:0006355
Aev04g0964 204 MobiDBLite consensus disorder prediction 17 48 - -
Aev04g0964 204 MobiDBLite consensus disorder prediction 126 145 - -
Aev04g0964 204 Pfam CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B 110 165 IPR001289 GO:0003700|GO:0006355
Aev04g0964 204 MobiDBLite consensus disorder prediction 125 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g0964 Aev-Chr4 5920348 5922286 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g0964 2 204 CCAAT-HAP2 Transcription Factor Family AT1G30500 55.122 3.92e-70 210
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YA Aev04g0964 CBFB_NFYA 5.4e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g0964 K08064 - gmx:100809036 318.931