Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g0947 ATGAGGAAACCTGGAGAGCAATCATCAACAACGACAACAATGAAGAACAATAAGTTAAGGAAGGGGTTATGGTCGCCAGAGGAAGATGAGAAGCTAATGGGCTACATGATGAAGAACGGACAAGGTTGTTGGAGCGATGTGGCCAGAAATGCAGGTCTGCAAAGGTGTGGCAAGAGTTGTCGCCTTCGATGGATCAATTACTTGAGGCCTGACCTCAAACGAGGTGCATTCTCTCCCCAAGAAGAGGAACTAATCATTCACTTCCATTCCCTCCTTGGAAACAGATGGTCTCAAATAGCAGCACGGTTACCTGGGAGAACCGACAATGAAATAAAGAATTTTTGGAATTCAACGATAAAGAAAAGACTTAAGAACAACCAATCATCCACAACTTCACCAAATGCAAGTGATGAGTCCTCTTATGATCCTAACAGCAACAACAACAAAGACCACAACATCATGGGAAGTTTCAATAACAATTCTACACAATTACAATTTCATCATCATCAAAATGGTAGTGGTGATCACCATTTTATGCCAATAATGTTCAATTCTTCATCAACAATGCAAATTGAAAGGTTACCTATGCTAGAACATGGTCTAATAAACATGATGCCAACAACAACACATGGTGGTGGATTCTTCAAAGGTATAGGACCAAATTTCGGAGGTGGAATAATTGATGAAAACAATAAAGAGGAGTTTTATTTGGAAAATGGAGTGTTTGGGAGTGTAAATATTATTGGTGATGAAGAAAGGGGGAATAATAATCATAATAATATGTTTGTTGTTCCTCCTCTAGAGAGTGTTAATAGCACTATTTCTGACCATAACCTCAAAGTGGAGACAAGTGTGTGCATTCATGATAGAGACACTAACAATTACAGTTACTTTGATGACACAAACAGCATAGTTAATAATAAGAGAGATGGTGTGGTGGATAATAATAATAATAATTTGTTTGAGGAGTTGACACTGGGAGAGTGGGACTTGGAGGAGTTGATGAAAGATGTTTCCTCATTTCCCTTTCTTGATTTTTCAAGTTGTCCGATTTGA 1056 0.3845 MRKPGEQSSTTTTMKNNKLRKGLWSPEEDEKLMGYMMKNGQGCWSDVARNAGLQRCGKSCRLRWINYLRPDLKRGAFSPQEEELIIHFHSLLGNRWSQIAARLPGRTDNEIKNFWNSTIKKRLKNNQSSTTSPNASDESSYDPNSNNNKDHNIMGSFNNNSTQLQFHHHQNGSGDHHFMPIMFNSSSTMQIERLPMLEHGLINMMPTTTHGGGFFKGIGPNFGGGIIDENNKEEFYLENGVFGSVNIIGDEERGNNNHNNMFVVPPLESVNSTISDHNLKVETSVCIHDRDTNNYSYFDDTNSIVNNKRDGVVDNNNNNLFEELTLGEWDLEELMKDVSSFPFLDFSSCPI* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g0947 351 CDD SANT 76 116 IPR001005 -
Aev04g0947 351 MobiDBLite consensus disorder prediction 122 159 - -
Aev04g0947 351 Pfam Myb-like DNA-binding domain 21 68 IPR001005 -
Aev04g0947 351 Pfam Myb-like DNA-binding domain 74 117 IPR001005 -
Aev04g0947 351 PANTHER TRANSCRIPTION FACTOR MYB46 1 347 - -
Aev04g0947 351 SMART sant 73 121 IPR001005 -
Aev04g0947 351 SMART sant 20 70 IPR001005 -
Aev04g0947 351 ProSiteProfiles Myb-like domain profile. 16 68 IPR001005 -
Aev04g0947 351 CDD SANT 24 68 IPR001005 -
Aev04g0947 351 ProSiteProfiles Myb-like domain profile. 69 119 IPR001005 -
Aev04g0947 351 PANTHER MYB DOMAIN PROTEIN 55 1 347 - -
Aev04g0947 351 SUPERFAMILY Homeodomain-like 19 115 IPR009057 -
Aev04g0947 351 Gene3D - 18 74 - -
Aev04g0947 351 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 69 123 IPR017930 -
Aev04g0947 351 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 16 68 IPR017930 -
Aev04g0947 351 Gene3D - 75 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g0947 Aev-Chr4 5768758 5771673 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g0947 1 124 MYB Transcription Factor Family AT5G12870 83.065 9.07e-72 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Aev04g0947 Myb_DNA-binding 1.8e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g0947 K09422 - gmx:100785810 375.941