Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g0944 ATGATGGAAATAGGAATTCACATCTACTACGGCTCCTGTGTCTTCTTCTTCTCCAGAACTACAGAATTGAGCCCTTTTCGGCGTATGGCTTCGAATCAGATTCAGACATCTGCTACAAACCATGCAGGGGCAACCAATGATGATTTGTACAAAGAATTGTGGCATGCCTGTGCTGGACCCCTTGTTACTCTTCCTCGTGAAGGGGAAAGGGTTTATTATTTCCCACAAGGTCATATGGAACAGCTCGAGGCATCTATGAATCAGGGATTAGAGCAGCAAATGCCTTCCTTCAATCTGCCATCTAAAATATTGTGTAAAGTGGTCAATGTTCATCTTCGGGCTGAACCTGAAACTGATGAAGTATATGCGCAGATAACTTTGCTTCCTGAAGCAGATCAAAGTGAAGTGGTAAGCCCTGATGATCCTCTACCTGAACCACCAAAGTGTACAGTCCATTCATTTTGCAAGACACTTACTGCTTCTGATACCAGCACTCATGGAGGTTTCTCTGTTCTTCGAAGACATGCAGATGATTGTCTGCCACCACTGGATATGTCTCAGCAACCACCATGGCAAGAATTGGTTGCAACTGACTTGCATGGGAATGAATGGCATTTTCGACATATTTTTCGAGGTCAACCAAGGCGCCACCTACTAACCACTGGGTGGAGTGTCTTTGTCAGTTCCAAAAAGTTAGTGGCTGGTGATGCATTTATATTCTTAAGGGGTGAAAACGGAGAGCTGCGAGTTGGAGTCAGGAGGCTCATGAGACAGCAAAGCAATATGCCATCTTCAGTTATATCTAGCCACAGCATGCATCTTGGTGTTCTGGCCACTGCATCTCATGCCATTGCCACTGGAACGCTGTTTTCTGTATTTTACAAGCCCAGAACAAGTAGGTCAGAGTTTATTGTGAGTGTCAACAAGTATCTTGAAGCTCGAAGTCATAAACTTTCTGTTGGGATGAGATTCAAAATGAGATTTGAGGGTGATGAAGTTCCTGAAAGAAGGTTCAGTGGAACAATTGTGGGTGTTGGAGAGAATAAATCATCAGTATGGGCTGATTCTGAGTGGCGATCATTAAAGGTTCAATGGGATGAACCATCTTCAATTTTGCGTCCTGATAGTGTTTCATCATGGGAATTGGAGCCACTTGTGTCTACTGCTCCTGCAAACATCCAGCCAACCCAAAGAAACAAGAGATCACGGCCTCCCGTTCTGCCTTCAGCAATGCCTGATTCTTCTCTGCAAGGTGTATGGAAATCACCGGTTGAATCTCAATCTTTCTCTTATCGTGACTCTCAACACGGCCGAGATCTCTATCCATCACCCGTGTTCAATTCTACTGCAACTAAATTTCTTGGTTTTGGTGGAAATAACTCTGCTTCCAACAAGTCAATATATTGGTCTAATAGGATGGAAAACTCTATAGAATCATTTTCACCTATAGCACTTAAAGAATCCACAGAGAAGAGACAAAGCACTGTAAATGGATGTAGGCTCTTTGGGATTCAGTTACTTGAGAATTCTAATGCAGAAGAAAGTCTGCCAACTGTCACTTTGTCTGGAAAGGGTGATGATAGGTCTGTTCCATCTTTGGATGGCGAGTCTGATCAGTTTTCTGAACCATCAAATGTTAATCGATTTGATATTCCTTCTGCAAGTTATGATGCTGAAAAATCATGTTTGCGGTCTCCCCAGGAGTCACAAAGCAGGCAAATAAGAAGCTGCACAAAGGTTCACATGCAAGGTATGGCTGTTGGAAGGGCTGTGGACTTAACACGGTTTGATGGATATGGGGATCTGCTCAAGAAGTTGGAAGAGATGTTTGACATCAAGGGTGAGCTCTGTGGATCCACAAAAAAATGGCAGGTTGTCTACACTGATAATGAAGATGATATGATGATGGTTGGGGATGATCCGTGGCTTGAGTTCTGCAGTGTTGTGAGGAAAATTTTCATCTACACAGCAGAGGAGGTGAAGAAGCTTTCACCCAAAAACGGACTTCCAATAAATGAAGAAGTTAAAGCAAGCAAAGTGGATTCTGAAGCAGTGGTTAATCCTGAGGATCAGTCATCTATCGTGGGGCCGGGGTGCTAA 2100 0.4352 MMEIGIHIYYGSCVFFFSRTTELSPFRRMASNQIQTSATNHAGATNDDLYKELWHACAGPLVTLPREGERVYYFPQGHMEQLEASMNQGLEQQMPSFNLPSKILCKVVNVHLRAEPETDEVYAQITLLPEADQSEVVSPDDPLPEPPKCTVHSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHGNEWHFRHIFRGQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENGELRVGVRRLMRQQSNMPSSVISSHSMHLGVLATASHAIATGTLFSVFYKPRTSRSEFIVSVNKYLEARSHKLSVGMRFKMRFEGDEVPERRFSGTIVGVGENKSSVWADSEWRSLKVQWDEPSSILRPDSVSSWELEPLVSTAPANIQPTQRNKRSRPPVLPSAMPDSSLQGVWKSPVESQSFSYRDSQHGRDLYPSPVFNSTATKFLGFGGNNSASNKSIYWSNRMENSIESFSPIALKESTEKRQSTVNGCRLFGIQLLENSNAEESLPTVTLSGKGDDRSVPSLDGESDQFSEPSNVNRFDIPSASYDAEKSCLRSPQESQSRQIRSCTKVHMQGMAVGRAVDLTRFDGYGDLLKKLEEMFDIKGELCGSTKKWQVVYTDNEDDMMMVGDDPWLEFCSVVRKIFIYTAEEVKKLSPKNGLPINEEVKASKVDSEAVVNPEDQSSIVGPGC* 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g0944 699 SUPERFAMILY DNA-binding pseudobarrel domain 143 283 IPR015300 -
Aev04g0944 699 MobiDBLite consensus disorder prediction 680 699 - -
Aev04g0944 699 MobiDBLite consensus disorder prediction 388 403 - -
Aev04g0944 699 ProSiteProfiles PB1 domain profile. 575 668 IPR000270 GO:0005515
Aev04g0944 699 MobiDBLite consensus disorder prediction 515 547 - -
Aev04g0944 699 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 37 677 IPR044835 GO:0003677|GO:0006355|GO:0009725
Aev04g0944 699 SMART B3_2 154 256 IPR003340 GO:0003677
Aev04g0944 699 SUPERFAMILY CAD & PB1 domains 577 652 - -
Aev04g0944 699 MobiDBLite consensus disorder prediction 388 419 - -
Aev04g0944 699 PANTHER AUXIN RESPONSE FACTOR 9 37 677 - -
Aev04g0944 699 Pfam AUX/IAA family 572 665 IPR033389 -
Aev04g0944 699 Pfam B3 DNA binding domain 154 254 IPR003340 GO:0003677
Aev04g0944 699 Pfam Auxin response factor 280 362 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Aev04g0944 699 Gene3D - 317 390 - -
Aev04g0944 699 Gene3D - 570 664 - -
Aev04g0944 699 CDD B3_DNA 152 254 IPR003340 GO:0003677
Aev04g0944 699 Gene3D - 151 256 IPR015300 -
Aev04g0944 699 ProSiteProfiles B3 DNA-binding domain profile. 154 256 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g0944 Aev-Chr4 5738531 5744361 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g0944 37 693 B3 DNA Binding Superfamily AT1G59750 71.964 0.0 946
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Aev04g0944 AUX_IAA 5.9e-11 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g0944 K14486 - gmx:100793224 1216.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g0944 04 5738531 5744361 Aev04g0944 04 5738531 5744361 ECH