Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g0939 ATGGCTTCTTCTTCTTCTTCTTCAATTTGGCAACAATGTCCTCCAAATGAATGGGTGAAGGGAAAGTTGGTTGGATCTGGATCTTTTGGCAGTGTCCATATGGCGATGAATAAGTCCACAGGGGGGCTTTTTGTGGTGAAATCAACGCGTGGTGGGTCTGAATATGAATCATTAACTTTGGAAAATGAGGTCGAAATTCTCAAGAGTTTGAGGGAATCGCCATATGTTGTGCAATGTTTGGGGACAGATGAGGACGAATTTGGAAATGTGAAGAATGTGTTGATGGAGTATATGGGTGGAGGCAGTTTGGCTGACGTGGCAGTCAATTTTGGAGGGGCATTGGATGAAGAGGTGGTGAGGGTGTATACTAGAGAGATCCTTCGAGGGTTGCAGCATGTTCATGAGCAGGGCATTGTGCATTGCGACCTCAAGTGCAAGAATGTGCTCTTGGGCTCTGCTGGCAATATCAAGCTCGCTGATTTTGGATGTGCCAAAAGGGTAATAGATAAGAAGTCTAGATGTGTTGGTGGGACTCCTCTGTGGATGGCTCCTGAAGTGCTGAGGATGAATAACAATAGTTTTGATGATGACAAGTCATCATGGTCGACGGTGGATAGTGCGGCTGACATATGGTCATTGGGCTGTACTGTAATCGAGATGGCCACCGGAAGGCCTCCTTGGGCAGAGGAGCTGATGGCCTCTTCATCTAATCCCATGGCTATTATGCTCAAGATTGCCCATGGTGGTGATGATGCCATCCCTCAATTCCCCTCCCATTTCTCCATGGAAGGTCTTGATTTCTTGGCCAAGTGCTTCCATAGAGACCCCAAGAAGAGGTTCACAGCCAATCAGTTGCTTTCCCATCCATTTGTACTTTCAACATCTTGCTGCTCTGCCTCTTCTCCTCCTCATCAATATGCCTCATCACCCACAAGTGTCTTAGAGCAGCTTCAAGGTTTTGATGATGATTATGAAGAAGGAACCACAACTTCGGTATTGTGGCAATGTGATGTTGAAGATCATGACACTATTAATACTGCATTTTCAGGGTCATTTGGTGGTGGGCATTGGATTACTGTTAGATCTTCAGGGTGA 1095 0.4603 MASSSSSSIWQQCPPNEWVKGKLVGSGSFGSVHMAMNKSTGGLFVVKSTRGGSEYESLTLENEVEILKSLRESPYVVQCLGTDEDEFGNVKNVLMEYMGGGSLADVAVNFGGALDEEVVRVYTREILRGLQHVHEQGIVHCDLKCKNVLLGSAGNIKLADFGCAKRVIDKKSRCVGGTPLWMAPEVLRMNNNSFDDDKSSWSTVDSAADIWSLGCTVIEMATGRPPWAEELMASSSNPMAIMLKIAHGGDDAIPQFPSHFSMEGLDFLAKCFHRDPKKRFTANQLLSHPFVLSTSCCSASSPPHQYASSPTSVLEQLQGFDDDYEEGTTTSVLWQCDVEDHDTINTAFSGSFGGGHWITVRSSG* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g0939 364 ProSitePatterns Serine/Threonine protein kinases active-site signature. 138 150 IPR008271 GO:0004672|GO:0006468
Aev04g0939 364 ProSitePatterns Protein kinases ATP-binding region signature. 24 47 IPR017441 GO:0005524
Aev04g0939 364 SUPERFAMILY Protein kinase-like (PK-like) 15 328 IPR011009 -
Aev04g0939 364 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 12 326 - -
Aev04g0939 364 CDD STKc_MAPKKK 17 291 - -
Aev04g0939 364 Gene3D Transferase(Phosphotransferase) domain 1 15 346 - -
Aev04g0939 364 SMART serkin_6 18 291 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev04g0939 364 Pfam Protein kinase domain 20 291 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev04g0939 364 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE NPK1-LIKE 12 326 - -
Aev04g0939 364 ProSiteProfiles Protein kinase domain profile. 18 291 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g0939 Aev-Chr4 5706033 5707779 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g0939 17 316 MAP Kinase Kinase Kinase AT2G32510 38.614 4.26e-66 212
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Aev04g0939 Pkinase 5.8e-59 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g0939 - K20716 mtr:MTR_2g005290 382.489
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g0939 04 5706033 5707779 Aev04g0939 04 5706033 5707779 ECH