Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g0938 ATGGGAAGGAAGAAGACAGAGGAAGCAGGCCCATCTGCAAAGACTAAGGTAAGTGGCAAAGATGCTTCTAAGAAGGAAAAAATATCTGTCTCTGCCTTGCTGGCCAGTATGGATGTGAAGCCTGATAAACCCAAAAAAGCCTCTTCTTCCTCCAATAAGCCCAAGGCAAAATCTGCCCCTAAAGCTTCTGCATACACTGATGACATTGATCTTCCCCCCTCGGATGATGAAGATGATGATGAAGATATCTTGGAAGAGGAGCATGAGCTAAATAATTCGTCTAAACGGTCTAGTCAGCAGCAGAGGCCTGATTTGAAGCCACTTGATGTATCAATTGCAGAAAAGGAGTTGAAAAAGCGTGAAAAGAAGGATCTTCTAGCAGCCCATGCTGTTGAGCTGGCAAAGAAGGAAGCTCTTAAGGATGATCATGATGCTTTCACTGTGGTCATTGGAAGCCGAAGTTCAGTGCTTGATGGAGAAGATGATGCTGATGCTAATGTCAAAGATATAACAATAGAGAATTTTTCTGTGTCTGCTCGGGGCAAGGAACTTCTGAAGAATGCATCGGTGAAGATATCTCATGGGAAGAGGTATGGTTTGGTCGGGCCCAATGGAAAGGGCAAGTCCACACTATTGAAGCTTCTTGCTTGGAGGAAGATACCAGTACCTAGGAATATTGATGTCCTTCTGGTTGAACAGGAGGTGGTTGGTGATGATAAAACAGCTCTTGAAGCTGTTGTTTCAGCTAATGAAGAGCTAGTTAAGATTCGACAAGAAGTTGCTTGTCTGCAAAATGCAACCTGTGCTGAAGATATTGTGGACAAAGATAATAATTATGAGGAAGACGATGCAGGAGAGAAGCTGGCAGAGCTGTATGAAAAACTACAGCTGATGGGTTCTGATGCTGCTGAAGCCCAAGCATCAAAGATTTTGGCTGGTTTGGGTTTTACAAAGGATATGCAGAGTCGCCCTACAAAATCCTTTAGTGGTGGCTGGAGGATGAGGATTTCTTTAGCTCGAGCACTTTTTGTGCAGCCAACTCTATTATTGCTTGATGAACCCACAAATCACCTTGACCTGAGGGCTGTTCTCTGGTTGGAAGAGTACTTGTGCCGTTGGAAGAAGACGTTGGTGGTTGTCTCACATGATAGGGATTTCCTCAATACAGTTTGTTCTGAGATTATTCATCTGCATGATTTGAAACTCTATGTCTATCGTGGAAATTTTGATGACTTTGAGAGTGGGTATGAACAGCGCCGTAAAGAGATGAATAAGAAGTACGAGATTTATGACAAGCAATTGAAAGCTGCTAAAAGGAGTGGAAACCGAGCTCAGCAAGAAAAGGTGAAGGATCGAGCTAAGTTTGCAGCAGCCAAGGAAGCATCTAAAAGCAAGGGCAAAGGCAAGGTTGATGAGGATGAGGCCCCACCAGAGGTCCCACAGAAGTGGAGGGATTATAGTGTTGAGTTCCACTTTCCTGAACCTACTGAGCTCACACCCCCACTTCTGCAGCTTATTGAAGTGAGCTTCAGCTACCCAAATCGGGAGGATTTCAGACTCTCAAATGTTGATGTTGGCATCGATATGGGAACTCGTGTTGCCATTGTTGGGCCTAATGGAGCTGGAAAATCTACACTGTTGAACCTTCTGGCAGGCGATTTGGTTGCAACAGAAGGTGAAGTTCGAAGGAGTCAGAAGTTGAGGATAGGAAGATACTCCCAACACTTTGTGGACCTTCTAACAATGGATGAAACCCCTGTTCAGTATCTTCTTCGGCTACACCCAGATCAGGAGGGGCTTAGCAAGCAGGAGGCTGTGCGTGCAAAACTCGGTAAGTTTGGGCTACCTAGTCATAACCACCTTACTCCAATTGCCAAACTATCAGGAGGGCAGAAAGCTCGGGTGGTCTTCACGTCAATATCCATGTCAAAACCGCACATTTTGTTGTTAGATGAACCCACTAATCATCTAGACATGCAAAGCATTGATGCATTGGCTGATGCGCTGGATGAGTTCACTGGTGGAGTTGTTCTTGTAAGTCATGATTCAAGATTGATATCGCGTGTATGTGAGGACGAACAGAGGAGTCAAATATGGGTGGTTGAGGATGGCACTGTCAGAACTTTCCCCGGAACATTTGACGATTATAAGGAGGAGCTGCTGAGGGAAATTAAAGCTGAAGTTGATGACTGA 2193 0.4482 MGRKKTEEAGPSAKTKVSGKDASKKEKISVSALLASMDVKPDKPKKASSSSNKPKAKSAPKASAYTDDIDLPPSDDEDDDEDILEEEHELNNSSKRSSQQQRPDLKPLDVSIAEKELKKREKKDLLAAHAVELAKKEALKDDHDAFTVVIGSRSSVLDGEDDADANVKDITIENFSVSARGKELLKNASVKISHGKRYGLVGPNGKGKSTLLKLLAWRKIPVPRNIDVLLVEQEVVGDDKTALEAVVSANEELVKIRQEVACLQNATCAEDIVDKDNNYEEDDAGEKLAELYEKLQLMGSDAAEAQASKILAGLGFTKDMQSRPTKSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRWKKTLVVVSHDRDFLNTVCSEIIHLHDLKLYVYRGNFDDFESGYEQRRKEMNKKYEIYDKQLKAAKRSGNRAQQEKVKDRAKFAAAKEASKSKGKGKVDEDEAPPEVPQKWRDYSVEFHFPEPTELTPPLLQLIEVSFSYPNREDFRLSNVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLVATEGEVRRSQKLRIGRYSQHFVDLLTMDETPVQYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMSKPHILLLDEPTNHLDMQSIDALADALDEFTGGVVLVSHDSRLISRVCEDEQRSQIWVVEDGTVRTFPGTFDDYKEELLREIKAEVDD* 731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g0938 730 Coils Coil 246 266 - -
Aev04g0938 730 SMART AAA_5 529 705 IPR003593 -
Aev04g0938 730 SMART AAA_5 194 400 IPR003593 -
Aev04g0938 730 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 503 728 IPR003439 GO:0005524
Aev04g0938 730 MobiDBLite consensus disorder prediction 70 87 - -
Aev04g0938 730 PANTHER ATP-BINDING TRANSPORT PROTEIN-RELATED 5 730 - -
Aev04g0938 730 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 170 410 IPR027417 -
Aev04g0938 730 Gene3D - 167 453 IPR027417 -
Aev04g0938 730 Pfam ABC transporter 185 356 IPR003439 GO:0005524
Aev04g0938 730 CDD ABCF_EF-3 170 401 - -
Aev04g0938 730 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 170 431 IPR003439 GO:0005524
Aev04g0938 730 MobiDBLite consensus disorder prediction 1 109 - -
Aev04g0938 730 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 482 716 IPR027417 -
Aev04g0938 730 PANTHER - 5 730 - -
Aev04g0938 730 ProSitePatterns ABC transporters family signature. 328 342 IPR017871 GO:0005524
Aev04g0938 730 MobiDBLite consensus disorder prediction 437 478 - -
Aev04g0938 730 Coils Coil 420 440 - -
Aev04g0938 730 Gene3D - 469 729 IPR027417 -
Aev04g0938 730 CDD ABCF_EF-3 503 705 - -
Aev04g0938 730 Pfam ABC transporter 520 655 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g0938 Aev-Chr4 5700275 5702467 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g0938 502 715 Calmodulin-binding Proteins AT2G36910 29.046 2.74e-13 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g0938 K06184 - gmx:100806865 1184.47