LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aev04g0907	ATGGATGATAACAATAATAGTAGTAGTGACGGTGGCATTTCCCCTAAGCATCATCCACGCAAGTCCTCCAAGGAGGACGATGCAGCAGAATCAGTTTTCTTACATGGTGACTTGGATATCTGGATTCTGGAAGCAAAATCTCTTCCCAATTTGGACATTTCCACCGAAACATTGCGGAAATGTATGACCATGTGCAACCGATGCTCCCCTCCCCTTGTCAAGGGCCTCAAGACACACTCGGGGAAGCACAAGATGATCACCAGTGACCCTTATGTCTCTGTTTGCCTCAGAGGGGCTACAATTGCTCAAACTAGGGTCATTCCTAACTGCGAGAACCCTTTGTGGGACGAGCATTTTCTTGTCCCTGTTGCTCACCCTGCTCAGAATGTGGAATTCCTTGTCAAGGATGATGATGTTCTTGGTGCCGAGCTCATTGGAGTTGTGGAGGTATCTGTCAACAAGATTTTGTCAGGGAATAAGATCAACGATTGGTTTCCAATCATTAGCAATCATTCGAGCTGCTTGAAGCCTTATCCTGAATTGCATCTGTCCATTCAGTTTAGGCCAGTTGGGGTGAACTCTTCAGGGGATACAGGTAACGAGGCAGAGAAACATGATCTGGAAATTCCTAATACTTATTTTCCTCTCAGAAAAGGAGGGTCTGTGACCCTTTATCAAGATGCACATGTTCCGGATAATAAGCTACCTGAGATTCAACTTGAGGGGGGGTGGTCGGTTTACCATCCGGTTAAGCTTATCAGGGAGCCATCAAAGCCATTGCCTTCAGGTGGAGAGCTTACGCTCGGAGAGTTGTTGAAATACAAGTCACAAGAAGGGGTTCGCGTAGTTATGCTGATTTGGGCTGACAAGACTTCCCATGACAAATTCTTTTTCAAAACAGTTGTGGGAACCTTTTTTACGCACCATCAGAAGTGTGTGCTTGTAGACACTCAAGCTTCTGGGAATAATCGGAAAATAACTGCTTTTATTGGTGGCTTGGATCTCTGTGATGGCAGATATGATACTCCTGAGCATCGCCTTTTTGCTGATCTAGACTCTGTCTTTCAAAATGATTTTCATAACCCCACATTTACGTCAAGTTCACATGCTGGACCAAGGGAGCCATGGCATGACCTGCATTGCAAAGTTGAGGGTCCAGCTGCATATGATATATTGACTAATTTTGAACAAAGATGGAGGAAGGCCAAAAAATGGCGCGATTTTCGGCTCAGAAGGGTGACAAGTTGGCATGATGATGCTTTACTAAGCCTAGATCGTATGTCATGGATTCTCACTCCATCTTCCGGTCCTGATGGTGAGAAAGTTGTTCGTGTAACGGAAGAAGATGATCCTGAGAGTTGGCATGTACAGGTATTTCGGTCCATAGATTCAGGATCCGTGAAGGGCTTTCCAAAGAATTTTGTGGAAGCAAAGTCTCAGAACCTTTTCTGTGGAAAGAATTTGAAAGTAGAAAAAAGCATCCATGCGGCTTATGTAAAAGCAATAAGATCAGCACAGCACTTCATCTATATTGAGAATCAGTATTTTCTGGGATCCTCATATAACTGGCAGTCACACAAAGGTGCAGGTGCGAACCATTTGGTTCCCATGGAATTGGCTTTAAAAATTGCCAGCAAGATCAGTGCAAATGAACGTTTTGCTGCCTACATACTTATACCAATGTGGCCAGAGGGGGTTCCTAGTAGTGCTGCTGTTCAAGAAATTCTTTACTGGCAGGGACAGACAATGTCTATGATGTACAGGCTCGTCGCTGATGCCCTTGAGAAAGCAGGTCTTTCCGATCAGTTTCATCCACAAGATTATCTCAATTTTTACTGTCTCGGAAAGCGTGAACCTCAACCTTCACAATGTCCACCAACTCAGCAATCTGAAAATCGTGGTCTGGCCTCAGTCAAGAAATTCAGACGTTTCATGATTTATGTTCATGCGAAAGGGATGATAGTTGATGATGAATACGTTCTCATGGGATCTGCAAATATCAACCAAAGATCCATGGATGGCTCAAGGGACACAGAAATAGCTATGGGAGCTTATCAGCCAAAGTATACATGGAAAGAAAAGAATACTCATCCACGTGGCCAGGTGTATGGTTATAGAATGTCATTATGGGCTGAGCACCTTGGTAGCGTAGAGGAAACATTTGAAGAACCAAAGAGGCTGGAATGTGTTAGATATGTGAACAACATAGCCAAACAAAACTGGGAAGCATACGTGTCTGAGGATGGGAAGCAGAAGATGAGGGGACATTTGATGCAGTACCCAATTAACATAAGACATGATGGGAAACTAAGTACACTGCCAAATTATGAGTCGTTTCCTGATGTTGGTGGTAAAGTTCTTGGATCAGTCAATTCTCTTCCGGATTCACTAACTACATGA	2400	0.4387	MDDNNNSSSDGGISPKHHPRKSSKEDDAAESVFLHGDLDIWILEAKSLPNLDISTETLRKCMTMCNRCSPPLVKGLKTHSGKHKMITSDPYVSVCLRGATIAQTRVIPNCENPLWDEHFLVPVAHPAQNVEFLVKDDDVLGAELIGVVEVSVNKILSGNKINDWFPIISNHSSCLKPYPELHLSIQFRPVGVNSSGDTGNEAEKHDLEIPNTYFPLRKGGSVTLYQDAHVPDNKLPEIQLEGGWSVYHPVKLIREPSKPLPSGGELTLGELLKYKSQEGVRVVMLIWADKTSHDKFFFKTVVGTFFTHHQKCVLVDTQASGNNRKITAFIGGLDLCDGRYDTPEHRLFADLDSVFQNDFHNPTFTSSSHAGPREPWHDLHCKVEGPAAYDILTNFEQRWRKAKKWRDFRLRRVTSWHDDALLSLDRMSWILTPSSGPDGEKVVRVTEEDDPESWHVQVFRSIDSGSVKGFPKNFVEAKSQNLFCGKNLKVEKSIHAAYVKAIRSAQHFIYIENQYFLGSSYNWQSHKGAGANHLVPMELALKIASKISANERFAAYILIPMWPEGVPSSAAVQEILYWQGQTMSMMYRLVADALEKAGLSDQFHPQDYLNFYCLGKREPQPSQCPPTQQSENRGLASVKKFRRFMIYVHAKGMIVDDEYVLMGSANINQRSMDGSRDTEIAMGAYQPKYTWKEKNTHPRGQVYGYRMSLWAEHLGSVEETFEEPKRLECVRYVNNIAKQNWEAYVSEDGKQKMRGHLMQYPINIRHDGKLSTLPNYESFPDVGGKVLGSVNSLPDSLTT*	800

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aev04g0907	799	Pfam	Phospholipase D C terminal	718	789	IPR024632	-
	Aev04g0907	799	Gene3D	C2 domain	32	188	IPR035892	-
	Aev04g0907	799	PANTHER	PHOSPHOLIPASE D	243	300	IPR015679	-
	Aev04g0907	799	Gene3D	Endonuclease Chain A	265	419	-	-
	Aev04g0907	799	SUPERFAMILY	Phospholipase D/nuclease	267	414	-	-
	Aev04g0907	799	SMART	C2_3c	37	164	IPR000008	-
	Aev04g0907	799	Pfam	Phospholipase D Active site motif	304	339	IPR001736	GO:0003824
	Aev04g0907	799	CDD	C2_plant_PLD	32	188	-	-
	Aev04g0907	799	Pfam	PLD-like domain	638	680	IPR025202	-
	Aev04g0907	799	SUPERFAMILY	Phospholipase D/nuclease	494	726	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Aev04g0907	Aev-Chr4	5516471	5520589	Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aev04g0907	32	798	Phospholipase D Gene Family (Wang group)	AT2G42010	50.058	0.0	828

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aev04g0907	K01115		-	gmx:100779740	1223.76

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Aev04g0907	04	5516471	5520589	Aev04g0907	04	5516471	5520589	ECH

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