Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g0896 ATGGATGAGGAGAGGAATAATGATTTGGGTTCATATGATGCTCATCACCTAGCAGCCTCTGGCTTGAAGAAGAGTACTAGCAGGAAGCAGAGGCATCATGATGATGAGCTTAAAGAAGAATATATGTCTGGATCTTTCAATCTGCAGAATGTTTCAAAGCTCATTCTTCCACCACTTGGTGTTTCCAACCAGAACCCACTAAACTCAAAAGGCTGGATCATATCCCCAATGGATTCAAGATACAGGTGTTGGGAGAGCTTGATGGTGGTTCTGGTGGCATATTCAGCGTGGGTCTATCCCTTTGAAGTTGCTTTCATGCACTCCTCACTTCCCCATTCCAAACTCTACATTGTTGACAATCTTGTTGACCTCTTCTTCTCCGTTGACATCATCTTGACTTTCTTCCTCGCTTACATTGATGGAACCACTCATCTTCTTGTTCGTCACTCCAAAAAGATTGCGCTCAGGTACTTGTCTACATGGTTTGTGATGGATGTGGCATCAACTATTCCATATGAGGCAATTGGCTATTTCTTAACTGGCAAACACAAAGTTAGCCTCCCTTACTTTCTATTGGGCCTGCTTAGATTTTGGCGTCTCAGACGGGTCAAGCAATTCTTCACAAGGCTTGAGAAAGACATAAGGTTCAGCTATTTCTTGGTCCGGTGTGCTAGGCTTCTCTCTGTAACACTATTTTCAGTTCATTGTGCTGGATGTCTGTATTACTTGCTAGCAGATAGGTACCCTTACCAAGGGAAGACATGGATTGGAGCAGTGATCCCAAACTTCAGAGAGACAAGCCTTTGGATCAGATACATTTCAGCCATGTACTGGTCCATCACCACCATGTCCACTGTTGGCTATGGAGACCTCCATGCTGTCAACACCATGGAAATGATCTTCATCATCTTCTACATGCTCTTCAACCTCGGCCTCACCGCTTACTTGATTGGCAACATGACAAATCTTGTTGTTGAAGGAACTCGCCGTACCATGGAATTTAGGAATAGCATTGAAGCGGCATCAAACTTTGTGTGCCGAAACCGGCTTCCTCCGAGGTTGAAAGAGCAGATTCTGGCTTACATGTGTCTAAGATTTAAAGCTGAGAGCTTAAATCAGCATCATCTTATTGAACAGCTACCAAAGTCCATTTGCCAGAGCATCTGCCAGCATTTGTTTTTTGCAACTGCAGAGAAAGCTTATCTTTTCAAAGGGGTCTCAAAAGAAATTCTTCTGTCCTTGGTTGCAAAAATGAAGGCAGAATATATACCACCTAGAGAGGATGTAATCATGCAAAATGAAGCACCAGATGATGTTTACATTATAGTTTCTGGAGAGGTGGAGTTCATAGACAGTAGTGCAATGGAGAAAGAGAGAATATTAGGGACTCTTCACACTGGTGACATGTTTGGAGAAGTTGGTGCACTTTGTTGCAGGCCTCAGAGCTTTACCTTCAGAACAAAGACTCTCACACAGCTCCTGAGGCTCAAAACCAGTACACTCTTAGAAACAATGCAGATTAGAAAAGAAGACAACATACAAATACTCAAAAACTTCCTTCAGCACTTCAAGCAACTTAAGGATCTAAGTATCAGAGACTTAATGGTTGAGAGTGTGGAAGAAGAGGACCCAAACATGGCTGTGAACTTGTTAACTGTGGCCAGCACAGGCAATGCTCTATTTCTTGAGGAGCTTCTAAGAGCAGGTTTGGATCCTGACATTGGAGACTCCAAAGGCAAAACCCCATTGCACATAGCAGCATTAAATGGGCATGAAGAGTGTGTTAAAGTTTTACTCAAGCATGCATGCAACTTACATCTAAGAGATATGAATGGTAACACTGCACTATGGGATGCTATAGAATCAAAGCATTACTCCATATTCCGGATACTGTTCCATCTTGCTGCTCTCTCTGATCCACACACATCAGGGAATCTCCTATGCACAGCAGCAAGAAGAAATGATCTAACAGTGATGAAGGAACTTCTGAAGCAAGGACTAAATATCAACTCAAAAGACCACCAAGGAAAAGCAGCAATCCAAATTGCCATGGCAGAGAATCATGTGGACATGGTTGAGTTTCTTGTGATGAATGGTGCAGATGTAAGTGATGCACACACTCATGGATTCTCTGCATCCTCCTTAAATGAAATGCTGCAGAAGCGCGAAATCGGGCATCGAATCAATGTGGATGAGGCCATACCAAGTGAGTTTGTGTTAAGGGGAAGGCATCAAGAAGAGCAAGAGCATCAAAGATCTAATAATGGACAACTATGCTGTCCAAGAGTAAGCATTTATAAAGGTCACCCTATTGAGAGAAGACAAAAAGGTCTCATGGATCCTGGGAAGCTAATAAGATTGCCTAATTCATTAGATGAACTCAAAATCATTGCAGGTGAAAAATTTGGGTTTGATGCAAAAGATGCAATGGTGACAGATGAAGGAGGAGCAGAAATAGACTGTATTGATGTGATCAGAGATAACGATAAGCTTTTTGTTGTTGAATGTATACCTAAATGA 2520 0.423 MDEERNNDLGSYDAHHLAASGLKKSTSRKQRHHDDELKEEYMSGSFNLQNVSKLILPPLGVSNQNPLNSKGWIISPMDSRYRCWESLMVVLVAYSAWVYPFEVAFMHSSLPHSKLYIVDNLVDLFFSVDIILTFFLAYIDGTTHLLVRHSKKIALRYLSTWFVMDVASTIPYEAIGYFLTGKHKVSLPYFLLGLLRFWRLRRVKQFFTRLEKDIRFSYFLVRCARLLSVTLFSVHCAGCLYYLLADRYPYQGKTWIGAVIPNFRETSLWIRYISAMYWSITTMSTVGYGDLHAVNTMEMIFIIFYMLFNLGLTAYLIGNMTNLVVEGTRRTMEFRNSIEAASNFVCRNRLPPRLKEQILAYMCLRFKAESLNQHHLIEQLPKSICQSICQHLFFATAEKAYLFKGVSKEILLSLVAKMKAEYIPPREDVIMQNEAPDDVYIIVSGEVEFIDSSAMEKERILGTLHTGDMFGEVGALCCRPQSFTFRTKTLTQLLRLKTSTLLETMQIRKEDNIQILKNFLQHFKQLKDLSIRDLMVESVEEEDPNMAVNLLTVASTGNALFLEELLRAGLDPDIGDSKGKTPLHIAALNGHEECVKVLLKHACNLHLRDMNGNTALWDAIESKHYSIFRILFHLAALSDPHTSGNLLCTAARRNDLTVMKELLKQGLNINSKDHQGKAAIQIAMAENHVDMVEFLVMNGADVSDAHTHGFSASSLNEMLQKREIGHRINVDEAIPSEFVLRGRHQEEQEHQRSNNGQLCCPRVSIYKGHPIERRQKGLMDPGKLIRLPNSLDELKIIAGEKFGFDAKDAMVTDEGGAEIDCIDVIRDNDKLFVVECIPK* 840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g0896 839 Pfam Ion transport protein 82 331 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Aev04g0896 839 ProSiteProfiles Ankyrin repeat region circular profile. 578 609 - -
Aev04g0896 839 Gene3D - 82 325 - -
Aev04g0896 839 PRINTS Ankyrin repeat signature 579 594 IPR002110 GO:0005515
Aev04g0896 839 PRINTS Ankyrin repeat signature 691 705 IPR002110 GO:0005515
Aev04g0896 839 Gene3D - 547 726 IPR036770 -
Aev04g0896 839 Pfam KHA, dimerisation domain of potassium ion channel 761 833 IPR021789 -
Aev04g0896 839 PANTHER POTASSIUM CHANNEL AKT1 27 837 IPR045319 GO:0005249|GO:0006813
Aev04g0896 839 SUPERFAMILY Ankyrin repeat 510 714 IPR036770 -
Aev04g0896 839 PANTHER POTASSIUM CHANNEL AKT2/3-LIKE 27 837 - -
Aev04g0896 839 SUPERFAMILY Voltage-gated potassium channels 76 325 - -
Aev04g0896 839 ProSiteProfiles cAMP/cGMP binding motif profile. 402 522 IPR000595 -
Aev04g0896 839 Pfam Ankyrin repeats (3 copies) 554 633 IPR002110 GO:0005515
Aev04g0896 839 Pfam Ankyrin repeats (3 copies) 639 703 IPR002110 GO:0005515
Aev04g0896 839 Pfam Cyclic nucleotide-binding domain 422 506 IPR000595 -
Aev04g0896 839 CDD CAP_ED 402 516 IPR000595 -
Aev04g0896 839 ProSiteProfiles KHA domain profile. 762 839 IPR021789 -
Aev04g0896 839 ProSiteProfiles Ankyrin repeat profile. 675 707 IPR002110 GO:0005515
Aev04g0896 839 SUPERFAMILY cAMP-binding domain-like 329 522 IPR018490 -
Aev04g0896 839 SMART cnmp_10 402 520 IPR000595 -
Aev04g0896 839 PRINTS EAG/ELK/ERG potassium channel family signature 130 139 IPR003938 GO:0005249|GO:0006813|GO:0016020
Aev04g0896 839 PRINTS EAG/ELK/ERG potassium channel family signature 298 309 IPR003938 GO:0005249|GO:0006813|GO:0016020
Aev04g0896 839 PRINTS EAG/ELK/ERG potassium channel family signature 119 129 IPR003938 GO:0005249|GO:0006813|GO:0016020
Aev04g0896 839 PRINTS EAG/ELK/ERG potassium channel family signature 272 289 IPR003938 GO:0005249|GO:0006813|GO:0016020
Aev04g0896 839 PRINTS EAG/ELK/ERG potassium channel family signature 316 325 IPR003938 GO:0005249|GO:0006813|GO:0016020
Aev04g0896 839 SMART ANK_2a 642 671 IPR002110 GO:0005515
Aev04g0896 839 SMART ANK_2a 578 607 IPR002110 GO:0005515
Aev04g0896 839 SMART ANK_2a 611 640 IPR002110 GO:0005515
Aev04g0896 839 SMART ANK_2a 675 704 IPR002110 GO:0005515
Aev04g0896 839 SMART ANK_2a 545 574 IPR002110 GO:0005515
Aev04g0896 839 ProSiteProfiles Ankyrin repeat profile. 642 674 IPR002110 GO:0005515
Aev04g0896 839 Gene3D Jelly Rolls 369 544 IPR014710 -
Aev04g0896 839 ProSiteProfiles Ankyrin repeat profile. 578 610 IPR002110 GO:0005515
Aev04g0896 839 ProSiteProfiles Ankyrin repeat region circular profile. 675 703 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g0896 Aev-Chr4 5430164 5436164 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g0896 12 583 Ion Channels AT4G22200 72.491 0.0 845
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g0896 K21867 - gmx:100798422 1334.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g0896 04 5430164 5436164 Aev04g0896 04 5430164 5436164 ECH