Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g0892 ATGGATTTTGGAAAGTCAAACATTGGTGACTTTGACTTGAACAAAGATTGGATGGAGGAGGATGAGGATGAGGACTTGGATTTGATGGATACTACTGAAAAAGATCCTTCATCACCATCACTACTCCTTGACTTGAACACTATTCCTCATAGTGATGATGACACTGATAACATGAACAAGGGTAGGGACAATGAAGTCCAGAAAACTACCTCTTCCTCTGATCATAGGGCTAAGAGGCATTGTCCAGCAAGACATTATTATGTTACATTCATCTCGTCTGGACCTCATGGACATGGCTTTACTGCAAAAGGCAAGCAACTCCAAGGCCGCGGCCGCCGCCATTACAACCGCCGTGCAGGAGTACTTGTGCAGAGTGATCCAAATAGATACTGCACAAATTATCATTGTAGGACAAGAAAAACTCCCCTGTGGCGCAAGGGCCCTCTAGGACCAAAGACTTTATGCAATGCATGTGGGATTGATTATATGAAGCAAGTGACAAGTAGAGGCAGTGGGATCACTACATTCTCAAATGTTGTTGCCAGTAATGATGCTTAG 558 0.4391 MDFGKSNIGDFDLNKDWMEEDEDEDLDLMDTTEKDPSSPSLLLDLNTIPHSDDDTDNMNKGRDNEVQKTTSSSDHRAKRHCPARHYYVTFISSGPHGHGFTAKGKQLQGRGRRHYNRRAGVLVQSDPNRYCTNYHCRTRKTPLWRKGPLGPKTLCNACGIDYMKQVTSRGSGITTFSNVVASNDA* 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g0892 185 ProSiteProfiles GATA-type zinc finger domain profile. 135 169 IPR000679 GO:0006355|GO:0043565
Aev04g0892 185 MobiDBLite consensus disorder prediction 1 78 - -
Aev04g0892 185 Gene3D - 127 178 IPR013088 GO:0006355|GO:0008270
Aev04g0892 185 CDD ZnF_GATA 135 164 IPR000679 GO:0006355|GO:0043565
Aev04g0892 185 MobiDBLite consensus disorder prediction 15 30 - -
Aev04g0892 185 Pfam GATA zinc finger 131 164 IPR000679 GO:0006355|GO:0043565
Aev04g0892 185 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 124 172 - -
Aev04g0892 185 MobiDBLite consensus disorder prediction 49 77 - -
Aev04g0892 185 PANTHER GATA TRANSCRIPTION FACTOR 64 165 - -
Aev04g0892 185 SMART GATA_3 127 178 IPR000679 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g0892 Aev-Chr4 5395360 5396357 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g0892 129 165 C2C2-Gata Transcription Factor Family AT3G20750 59.459 3.08e-12 60.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Aev04g0892 GATA 1.1e-13 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g0892 - - gmx:102663335 99.7525