Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g0888 ATGGGAAGAAGAGGAAGGTTGCTACATGAGACCCTTCACAGTCGAGTGGAATTATGCATGTACAGTTCCAATTCCACTCTCTCTCTCGACCAAATCATCGAACATCTTCGCTGCACTTTTCCTGAGGATTACCAACGTACCAAGCTCCAAGTCCTCACTCGCTCTGTTCGTCGTTACCTCCAATCACGTCCCAACCAACATTTTTCTCCAAATGCGTCTCGCAAGAGACCCAGGGCAATCATCGATAAGAGCTGCAGCGATCGGGTTCAATCTGGCTCTACATCTGCTAATTTCAGTTCGAGAGCTTCGTCGTTGTCCTCCACAGAGGAGGGAGAAGAACAAGACGAGAAATCCGAGCCGTCACCGGTTTTCGATTTGATGAAGACGATGCTGAGGAATTCGTATAACATCAAGGGAACAAAGGACGACGATAATAATGTGAAGAAGAAGAAGCAGAGGAACAAAAAGAATAAGAAGATTGCTGAATCAGAGGCGGAGACAGAGTTGGGCATGGGCAATTCTAGCAGCAAAGCTGTTTCTGCTGCTACTAACGAGGGAGGTGTTGAGAATGTGGAGGAGGTGATGAAGAAGAATAAGAAGGAGCTCATGTTCTGCGATTTGGGTGGCATTGGTCCCATTCTGGACTACCTTAGGACGGAAGTCATTGTGCCGCTTCAGAAGCACCGTTGCATCACACATGCAGGTGGTGCTCCTCTCCCTGGTATCTTGCTCCATGGACCACCAGGTTGTGGCAAGACCCAACTCGCTCATGCCATTGCCAATGCGTGTGCAATTCCCTTTTACCCCATTTCAGCTACCCAACTTGTTGCTGGAGTCTCAGGTGAATCTGAAGAAAACATTAGAGAGCATTTCTCTAAGGCATGCAGGACTGCTCCATCAATTATCTTCATAGATGAGATTGATGCCATTGCTCCAAAGAGAGATAGTTCACAGCGGCAGATGGAGATTAGGATCGTGACGGAGTTACTCACCTGCATGAGTCAATTGAGTTCTGTTGATGGTCCTCATGTTCTTGTGATCGGAGCAACCAATAGGCCTGATGCACTTGACCATGCAATCAGGAGGACCGGCCGATTTGAGCATGAGATTGCTATTGGTATCCCTGATGAATCTGCAAGGGAGGATATTCTTTCTGTCATTGTTCGCAGTCGCAATATGAAGATTGACGATAGTTCAGTTGATCTAAGAGAAATAGCCAGGTTCACCCCAGGATTTGTTGGTGCTGATTTGAAAGCTCTGGCTAACCAGGCTGTTAGGGTGGCAGTGAATAGAGTTATTGATGAACTTATATGTAAAGAATATCAAGATGGTACAAGTGATGAGCCCATTGAAGACGAGATTTTGGATAAGCTTAACGTCAAAATGTCGGATTTTAAGGAAGCTTTCAAAAAGGTGCAACCTTCATTGAAAAGAGAAGGGTTCTCTGCCATTCCTGATGTAAAATGGGAAGATGTTGGTGGGCTTGATAATATAAGAAAAGAGTTTGAACACTACATAGGAAACTGTATAAAATATCCCAAGGAATGTGAGGTAATTTTCAGATGGCTGATCAATCAGTGTTCTTGGATATATCTATTTGAGGAATTAGGGGTGGATATTGGTATGGGATTTTTGCTTTATGGACCTCCAGGTTGTGGTAAAACACTAATTGCTGAAGCCCTTGCGAATGAAGCAGGAGCTAATTTCATTCATGTTAAGGGGCCTGAACTTTTAACTAAATTTGTTGGAGAAAGTGAGCAGGCAGTTCGAACATTGTTTAGTCGTGCAAGGACATGTGCACCTTGTATAATCTTTTTTGATGAGGTGGATGCATTGACAGCTAGACGTGATGGAGAAGGTGGATCAGTGGTCGGTGATCGAGTAGTGGATCAGATACTAGTTGAATTAAATGGTGTAGAGAAGCGACGAGGTGTTTTTGTTGTTGGTGCTACTAATAGGCCTGAAGCTGTGGATCCTGCTATCCTTAGAGCTGGTAGGTTCGGTAGAAAACTTTATGTTCCTCATCCAACCGCTGAGGGGCGAGTTTCAATATTGAAAGCTCTTTCAAGGAAGAAACGCCTTGATGCTGAAGTGGATTTAGATGAGATTGCAAGAATGAAAGCTTGTAAAAATCTAAGTGGTGCTGAGCTTGCTGCATTGATGAATGAAGCGGCACTCGCAGCACTTAACGCGAATCGTGCGTCAATCAAGCGAAGTGATTTTGATGTAGCCGCCAGTCGAGTTGGTAATTGGACAAAGACATCAGAGTTTCATACATCTAGTAGTGTTTCTAAGAATCAAGATCCTTGTTGTTCTATATCAAGTACATTGGCGGATCTTCATAAGTTAAAAGTGGTGGTGGAAGATGATGATTTTTATGGCAGATGTTGTGAACTGATGATGGACAAGGATGCAAGGCAAGTCTTCTGTACAATTCCGGATGAGGATCACAAGATTATTTTTCTAAAGAGGATGGCCTATCGAGATTGA 2490 0.4398 MGRRGRLLHETLHSRVELCMYSSNSTLSLDQIIEHLRCTFPEDYQRTKLQVLTRSVRRYLQSRPNQHFSPNASRKRPRAIIDKSCSDRVQSGSTSANFSSRASSLSSTEEGEEQDEKSEPSPVFDLMKTMLRNSYNIKGTKDDDNNVKKKKQRNKKNKKIAESEAETELGMGNSSSKAVSAATNEGGVENVEEVMKKNKKELMFCDLGGIGPILDYLRTEVIVPLQKHRCITHAGGAPLPGILLHGPPGCGKTQLAHAIANACAIPFYPISATQLVAGVSGESEENIREHFSKACRTAPSIIFIDEIDAIAPKRDSSQRQMEIRIVTELLTCMSQLSSVDGPHVLVIGATNRPDALDHAIRRTGRFEHEIAIGIPDESAREDILSVIVRSRNMKIDDSSVDLREIARFTPGFVGADLKALANQAVRVAVNRVIDELICKEYQDGTSDEPIEDEILDKLNVKMSDFKEAFKKVQPSLKREGFSAIPDVKWEDVGGLDNIRKEFEHYIGNCIKYPKECEVIFRWLINQCSWIYLFEELGVDIGMGFLLYGPPGCGKTLIAEALANEAGANFIHVKGPELLTKFVGESEQAVRTLFSRARTCAPCIIFFDEVDALTARRDGEGGSVVGDRVVDQILVELNGVEKRRGVFVVGATNRPEAVDPAILRAGRFGRKLYVPHPTAEGRVSILKALSRKKRLDAEVDLDEIARMKACKNLSGAELAALMNEAALAALNANRASIKRSDFDVAASRVGNWTKTSEFHTSSSVSKNQDPCCSISSTLADLHKLKVVVEDDDFYGRCCELMMDKDARQVFCTIPDEDHKIIFLKRMAYRD* 830
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g0888 829 Gene3D - 375 479 - -
Aev04g0888 829 Coils Coil 146 166 - -
Aev04g0888 829 ProSitePatterns AAA-protein family signature. 344 362 IPR003960 GO:0005524|GO:0016887
Aev04g0888 829 PANTHER AAA-FAMILY ATPASE 83 766 - -
Aev04g0888 829 CDD AAA 237 373 - -
Aev04g0888 829 Gene3D - 485 675 IPR027417 -
Aev04g0888 829 CDD AAA 543 674 - -
Aev04g0888 829 Pfam AAA+ lid domain 698 742 IPR041569 -
Aev04g0888 829 Pfam AAA+ lid domain 399 438 IPR041569 -
Aev04g0888 829 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 202 480 IPR027417 -
Aev04g0888 829 MobiDBLite consensus disorder prediction 86 107 - -
Aev04g0888 829 ProSitePatterns AAA-protein family signature. 645 663 IPR003960 GO:0005524|GO:0016887
Aev04g0888 829 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 485 747 IPR027417 -
Aev04g0888 829 PANTHER NUCLEAR VALOSIN-CONTAINING PROTEIN-LIKE 83 766 - -
Aev04g0888 829 MobiDBLite consensus disorder prediction 168 183 - -
Aev04g0888 829 MobiDBLite consensus disorder prediction 85 184 - -
Aev04g0888 829 Pfam ATPase family associated with various cellular activities (AAA) 545 674 IPR003959 GO:0005524|GO:0016887
Aev04g0888 829 Pfam ATPase family associated with various cellular activities (AAA) 242 373 IPR003959 GO:0005524|GO:0016887
Aev04g0888 829 Gene3D - 676 745 - -
Aev04g0888 829 Gene3D - 188 374 IPR027417 -
Aev04g0888 829 SMART AAA_5 238 376 IPR003593 -
Aev04g0888 829 SMART AAA_5 540 677 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g0888 Aev-Chr4 5373929 5377661 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g0888 458 729 Calmodulin-binding Proteins AT3G56690 43.956 2.03e-60 220
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g0888 K14571 - gmx:100809594 658.677