Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g0867 ATGCGAGTTCAAGATACTCCACTTTGGCGAAATGGACCTGCTGAGAAGCCAGTTTTGTGCAATGCATGTGGATCACGATATAAGTCGAGAGGAACCCTTCACAACTATCTCCCTAAGAATGTTCAATTTAAGTTTCTTCTCATCAATGACAATGACGACACCAATCTCCTCAATGATGACGACTACAAGGATTCCCAGTTAGAAGGTGGGGGAAATGATAATGATAATACTAATAATAAGGATTTATTGACATCTAAGATCCCTTCAAAGAAACGGTCGCGGGTGGAGTACATGGAGGCGCCAGAGTCAGCACCAGCACGAGCTATGAAGAAATTTCATAAGGAGCTTTTAAGTCTGTACCGTAAAAGCAATCCTGATGAGTTTCTTCCAGAGGACGGTACGTTGATAGAAGATAATGTGAACAACTTCATACCCCCAAATGAGATTGGCCATGGAGCCATTCTTTTTAAGCCGCCACCACCAGCTGATGATGATAATAATGAGGGATCATCTACCATCACTTCAAATAATTAA 534 0.4176 MRVQDTPLWRNGPAEKPVLCNACGSRYKSRGTLHNYLPKNVQFKFLLINDNDDTNLLNDDDYKDSQLEGGGNDNDNTNNKDLLTSKIPSKKRSRVEYMEAPESAPARAMKKFHKELLSLYRKSNPDEFLPEDGTLIEDNVNNFIPPNEIGHGAILFKPPPPADDDNNEGSSTITSNN* 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g0867 177 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 4 50 - -
Aev04g0867 177 MobiDBLite consensus disorder prediction 60 91 - -
Aev04g0867 177 Gene3D - 2 111 IPR013088 GO:0006355|GO:0008270
Aev04g0867 177 SMART GATA_3 2 44 IPR000679 GO:0006355|GO:0043565
Aev04g0867 177 MobiDBLite consensus disorder prediction 69 84 - -
Aev04g0867 177 MobiDBLite consensus disorder prediction 148 177 - -
Aev04g0867 177 Pfam GATA zinc finger 4 32 IPR000679 GO:0006355|GO:0043565
Aev04g0867 177 CDD ZnF_GATA 6 32 IPR000679 GO:0006355|GO:0043565
Aev04g0867 177 PANTHER GATA ZINC FINGER PROTEIN 1 158 - -
Aev04g0867 177 PANTHER OSJNBB0038F03.10 PROTEIN 1 158 IPR044589 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g0867 Aev-Chr4 5280758 5284046 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g0867 3 82 C2C2-Gata Transcription Factor Family AT4G17570 45.000 1.09e-14 69.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Aev04g0867 GATA 7.8e-11 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g0867 - - ccaj:109803880 125.176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g2277 03 24514941 24521561 Aev04g0867 04 5280758 5284046 PCT
Aev04g0867 04 5280758 5284046 Aev03g2725 03 27276478 27277519 PCT