Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g0836 ATGGTTGGAAGTGCTGACAATTTGAGAGCCAATGGAGAAGTTGAAGTGTTGCCTGAGGATTTCGATGTGACATCTGTGATCAAAGAGCCTGTGCCACCTGCAGTTGGAGACAATCAAAAATCGAAAAGAGAGATAGTACTGGGAAGAAATGTTCACACTATGTGTCTAGAAGTCACAGAGCCTGATGCAGATGATGATGTTACTGGGGACCGGGAAGCTTACATGGCCGGCGTGTTGTCCAGATACAAGAAATCTTTGACTGAAAGGACAAAACATCATTTAGGTTACCCCTATAATTTGGATTTTGACTATGGTGCCCTCTCACAACTTCAGCACTTTTCCATAAACAACCTGGGGGATCCATTTATTGAAAGCAATTATGGTGTCCACTCCCGGCAGTTTGAAGTCGGTGTTTTGGATTGGTTTGCCCGGTTGTGGGAACTGGAGAAAGATGAATACTGGGGCTATATAACTAACTGTGGAACTGAAGGCAACCTCCATGGCATCCTAGTTGGGAGAGAGGTCCTTCCAGATGGGATTTTGTATGCCTCACGAGAATCACATTATTCTATTTTTAAAGCTGCTCGTATGTACAGAATGGAATGTGAGAAGGTTGCAACACTTTGGTCTGGGGAGATTGATTGTAATGATTTCAAGGACAAGCTTCTTCAACACAAGGATAAGCCAGCTATTGTAAATGTGAACATAGGTACAACTGTGAAAGGAGCTGTGGATGATCTTGATCTGGTCATAAAGACACTTGAAGACACGGGATTCTCACATGACAGGTTCTACATCCATTGTGATGGGGCTTTGTTTGGTCTCATGATGCCTTTTGTGAAACTTGCTCCAAAGGTTTCTTTTAAGAAGCCAATTGGCAGTGTTAGTGTTTCCGGCCACAAATTCGTGGGGTGCCCCATGCCTTGTGGTGTGCAGGTAACAAGATTGGTGCATATCAATGCTCTTTCCAGGAATGTAGAATACCTTGCTTCTAGGGATGCCACAATCATGGGTAGTCGGAATGGCCATGCTCCCATATTCCTTTGGTATACCCTAAACAGAAAAGGATACAGAGGTTTCCAGAAAGAAGTACAGAAATGCTTGAGGAATTCACACTACCTCAAAGACCGCCTTGTGGAGGCAGGGATCGGCGCAATGCTTAATGAGCTAAGCAACACGGTTGTGTTTGAGAGGCCGCATGACGAGGAGTTTGTGCGCAGGTGGCAGTTGGCTTGCCAGGGCAACATTGCGCATGTGGTAGTGATGCCAAACGTCACGAAGGAGAAGATCGATTATTTTCTGAACGAGCTTGTGGAGCAGCGTGCTGCCTGGTTCAAAGATGGCACATCTCAACCGCATTGTATTGCATCCGATGTTGGTGAAAGCAATTGCCTCTGTCTTGTGCACAAGCATAAGTGA 1419 0.4531 MVGSADNLRANGEVEVLPEDFDVTSVIKEPVPPAVGDNQKSKREIVLGRNVHTMCLEVTEPDADDDVTGDREAYMAGVLSRYKKSLTERTKHHLGYPYNLDFDYGALSQLQHFSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWELEKDEYWGYITNCGTEGNLHGILVGREVLPDGILYASRESHYSIFKAARMYRMECEKVATLWSGEIDCNDFKDKLLQHKDKPAIVNVNIGTTVKGAVDDLDLVIKTLEDTGFSHDRFYIHCDGALFGLMMPFVKLAPKVSFKKPIGSVSVSGHKFVGCPMPCGVQVTRLVHINALSRNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYRGFQKEVQKCLRNSHYLKDRLVEAGIGAMLNELSNTVVFERPHDEEFVRRWQLACQGNIAHVVVMPNVTKEKIDYFLNELVEQRAAWFKDGTSQPHCIASDVGESNCLCLVHKHK* 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g0836 472 Gene3D Aspartate Aminotransferase, domain 1 353 441 IPR015422 GO:0003824
Aev04g0836 472 SUPERFAMILY PLP-dependent transferases 89 442 IPR015424 -
Aev04g0836 472 Pfam Pyridoxal-dependent decarboxylase conserved domain 180 389 IPR002129 GO:0016830|GO:0019752|GO:0030170
Aev04g0836 472 PANTHER - 1 470 - -
Aev04g0836 472 Gene3D - 108 352 IPR015421 GO:0003824
Aev04g0836 472 PANTHER SERINE DECARBOXYLASE 1 470 - -
Aev04g0836 472 ProSitePatterns DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 294 315 IPR021115 GO:0016831
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g0836 Aev-Chr4 5111979 5115142 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g0836 220 376 Calmodulin-binding Proteins AT1G65960 28.488 4.46e-09 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g0836 K25193 - gmx:100785163 848.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g2224 03 24256017 24257815 Aev04g0836 04 5111979 5115142 PCT