Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g0813 ATGGCAGCTGCAACATCTGGTGCAGTGATAAATGGGTTGGGATCTTCTTTCTTATGTGGAGGAAAGAGGAGCCAAACCCTTCTTGGTTCTGCTATTGCAGGCAAAGCTGGTTCTTCTGTTAGTCCTAAAAGGACTGTTGTTGCTGCTGCTGCTGCACCTAAGAAGTCATGGATCCCTGCTGTTAAAGGTGGTGGAAACTTCATTGACCCAGAATGGCTTGATGGCTCGCTACCTGGTGACTTTGGGTTTGACCCACTAGGCCTAGGGAAGGACCCAGCATTCCTGAAATGGTACAGAGAAGCAGAACTCATTCATGGAAGGTGGGCAATGGCAGCAGTTTTGGGAATCTTTGTTGGCCAAGCATGGAGTGGAGTCCCTTGGTTTGAAGCTGGAGCTGACCCTAATGCAATTGCTCCTTTCTCCTTTGGCACTCTTTTGGGGACACAGTTGCTCCTGATGGGGTGGGTAGAGAGCAAGAGATGGGTGGATTTCTTCAACCCAGACTCACAGTCAGTGGAGTGGGCCACTCCATGGTCAAAAACTGCTGAGAACTTTGCCAATGCCACTGGTGATCAAGGATACCCTGGGGGCAAATTCTTTGACCCTTTGGGATTGGCTGGCACAATCAAGGATGGTGTTTACATTCCTGATAGGGAGAAGCTTGAGAGACTGAAACTGGCTGAGATTAAGCATGCTAGGATTGCTATGTTGGCTATGCTCATTTTCTACTTTGAGGCTGGACAAGGGAAGACTCCCCTTGGTGCTCTTGGCTTGTAA 777 0.4903 MAAATSGAVINGLGSSFLCGGKRSQTLLGSAIAGKAGSSVSPKRTVVAAAAAPKKSWIPAVKGGGNFIDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQAWSGVPWFEAGADPNAIAPFSFGTLLGTQLLLMGWVESKRWVDFFNPDSQSVEWATPWSKTAENFANATGDQGYPGGKFFDPLGLAGTIKDGVYIPDREKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL* 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g0813 258 PANTHER CHLOROPHYLL A-B BINDING PROTEIN CP24 10A, CHLOROPLASTIC 1 258 - -
Aev04g0813 258 Pfam Chlorophyll A-B binding protein 70 246 IPR022796 -
Aev04g0813 258 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 258 IPR001344 GO:0009765|GO:0016020
Aev04g0813 258 Gene3D Chlorophyll a/b binding protein domain 70 257 - -
Aev04g0813 258 SUPERFAMILY Chlorophyll a-b binding protein 67 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g0813 Aev-Chr4 4977753 4978707 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g0813 1 258 Chloroplast and Mitochondria Gene Families AT1G15820 85.328 2.05e-157 436
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g0813 K08917 - gmx:100783223 479.559
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g0813 04 4977753 4978707 Aev04g0813 04 4977753 4978707 ECH
Aev03g2199 03 24105860 24106763 Aev04g0813 04 4977753 4978707 PCT