Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g0805 ATGTCTCACTTCGGTAGGTCAGGTCCACCAGACATCAGCGACACGTACTCGCTGCTTGTGCTCAACATCACCTTCCGCACCTCCGCCGACGACCTCTTCCCTCTCTTCGACAAGTACGGCAAGGTTGTCGACATCTTCATCCCCAAGGACCGCCGCACCGGCGACTCCCGCGGCTTCGCCTTCGTCCGCTACAAGTACGCCGACGAGGCTCAGAAGGCCGTCGAACGTCTCGACGGCCGTCTCCTTGATGGCCGCGAAATCACTGTCCAGTTCGCCAAGTACGGCCCCAACGCCGAGCGCATCCACAAAGGCAGAATCGTTGAGTCCGTCCCTAGATCTAAGCACAGCCGCAGTCCCCCCAGGCGAAGGTACCGTGATGATGATTACAGAGAAAAAGATAGGAGGAGGAGGAGGAGTAGAAGCAGGAGTTATGACAGGTATGAACGTGACAGCTACCGCGGCAAGGACAGAGATTATCGTCGCCGGAGTGCCAGCCCAGATAACAAGGGTCGTGGAAGGGGGCGCTATGACGATGAGCGCCCTAGCCGGAGCCGATCAGCAGATAGCCGCTCCCCTGCTCGACGCAGTCCTAGTCCTGGAAGGAGTCTTTCCCCACGGAGAAGTGTCTCCCCGAGGAAGAAGAGTCCTAGGGGTGAAAGTCCCCGAAATGGACGCTCACCTACACCACACAGTGTCTCCCCACGTGGTCGAGGCTCACCTACACCTCGCAGCGTCTCCCCCCGTGGTCGAGGCTCACCTACACCTCGCAGCGTCTCCCCCCGTGGTCGAAGCCTCTCCCCACGAAAACCTGATGGTGATGTGAGTGACATTCATTCACCTTATAACTTTGAGTGGAAAGAAGAGCACCTGACACCTGTGGCAGTTTTGTTAATGTTGGATGTTTTGACCATGGAGGATGGTCTTGTTGGAGTCAATGAAGATTTATGA 948 0.5707 MSHFGRSGPPDISDTYSLLVLNITFRTSADDLFPLFDKYGKVVDIFIPKDRRTGDSRGFAFVRYKYADEAQKAVERLDGRLLDGREITVQFAKYGPNAERIHKGRIVESVPRSKHSRSPPRRRYRDDDYREKDRRRRRSRSRSYDRYERDSYRGKDRDYRRRSASPDNKGRGRGRYDDERPSRSRSADSRSPARRSPSPGRSLSPRRSVSPRKKSPRGESPRNGRSPTPHSVSPRGRGSPTPRSVSPRGRGSPTPRSVSPRGRSLSPRKPDGDVSDIHSPYNFEWKEEHLTPVAVLLMLDVLTMEDGLVGVNEDL* 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g0805 315 PANTHER SERINE/ARGININE-RICH SPLICING FACTOR SC35 1 248 - -
Aev04g0805 315 MobiDBLite consensus disorder prediction 103 276 - -
Aev04g0805 315 SUPERFAMILY RNA-binding domain, RBD 8 101 IPR035979 GO:0003676
Aev04g0805 315 MobiDBLite consensus disorder prediction 221 261 - -
Aev04g0805 315 MobiDBLite consensus disorder prediction 103 134 - -
Aev04g0805 315 MobiDBLite consensus disorder prediction 191 205 - -
Aev04g0805 315 SMART rrm1_1 17 90 IPR000504 GO:0003723
Aev04g0805 315 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 16 94 IPR000504 GO:0003723
Aev04g0805 315 SMART rrm2_1 17 90 IPR003954 GO:0003676
Aev04g0805 315 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 19 88 IPR000504 GO:0003723
Aev04g0805 315 PANTHER SERINE/ARGININE RICH SPLICING FACTOR 1 248 - -
Aev04g0805 315 MobiDBLite consensus disorder prediction 143 190 - -
Aev04g0805 315 Gene3D - 4 103 IPR012677 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g0805 Aev-Chr4 4941040 4942668 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g0805 13 92 Eukaryotic Initiation Factors Gene Family AT3G11400 35.000 1.24e-09 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g0805 K12891 - gmx:100778928 295.819