Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g0798 ATGGCCGCCGCCGCCGCCACCCCGCGGGCACCGCCGCCGCAGCAGCTGCTCAACTTGGAATCCATAGCTCGCATAGACTCAAGCACTCTCTCCCAGTCTGAGCTCCATGCTCTATCCCTCAGCTCACTCTCCCCCTTCGACCTCCGCTCCTCCGACCACCACCTTGTAACCCCCAAAATTGACCCAGCGATGTTCAACGAGAGCGCTGGATCTCGCCGTCAGACCTACTCCCGCCCGCGCCGCCCTCAGTCCTCTCCCACCGGCCGCCGCCGCCGCGTTACTGGCCTTCTCCCCGCTGCTAAGGTCCCTTCTCTCCCCGCCGATGATTCTGAAAATGTCGAGAACCGCGTCATAATCGATTACCTGAAGCAGTTCATCAGGGAAGACCCCAAATTCGATCAAATCGAGTTCGCTCCTCCGTCCGTTCCCGCGCAGGTCGCCGAAAATGGAGTCGCGGCGGCGGAGGGATCTGAGCTTGCAATCGTGAAATTCGGCGAGAGGAAGAGGAAGAGAGGGAGAAAGCCGAAGGTGAAGGTGCACCTGGACCTGGAGGAGTGCTACAGGGGAATGGAGATCGTGAACAAGAACGGCGTGGCGATTGATCTGGCGGCGCTGGCGGAGAGGGAAGACCCGTTTGCGGAGGAGCTGAGGAGGAGGACGGAGGGGCTGAAGGGCGAGGAGGAGCTGTTGGGGTTTCTGAGTGATTTGGAGGGACAGTGGGGGAGCAGGCGGAAGAAGAGGAGGATCGTCGATGCCGCCGGTTTCGGTGACGTGTTGCCGCTCGGTTGGAAGCTTCTTCTCGGTTTGAAGAGAAAGGATGGTCATGCATGGGTCTATTGCCGTAGATACATGAGCCCTAGTGGACAGCAATTTGTCTCTTGTAGAGAAGTTTCCTCGTATCTGCAGTCACTTTTGGGTCACGGCGACCCACAATTGCAAATCGGTTATAGAAATGAGAATATTACGCAGGAACACGGAACTACTACTGGAAACTTTGTAGGTGTTACCCATGAGGATCAAGATGATCGGCAAATTGTTCCTTTTAACTACGATGTGCCTATATCATCTGATTCTAATGAACGTTTGAAGGAAGTGGCCTTATTGGGGATGGAAAATCTTGCAGATGTAGAAATACGTGACCTATTTGAATGTCACAAGTGCAACATGGCCTTTGACGACAAGGATTCATACCTGCAGCATCTGTTGTCACTTCACCAGAGGATAACAAGGCGGTATCGTCTTGGTTCCTCAGTTGGAGATGGAGTTATAATTAAAGATGGAAAGTTTGAGTGCCAGTTCTGCCATAAGGTGTTTCTGGAAAGGCGTCGTTACAATAGCCATGTGGGGATCCACGTCAGGAGTTACGTGAGAAGAGCTGAAGATTCGCCAGGTCAGGCAAGTGACCAAAGGCAAGTCAAGTCTCCAATCAGGGAGGACATGCCTTCAAGGCTCTCAAAGATGGATGCTCTTATTGAAATTGCTCAAAACTCTATTATGGAGGATTCTGTCATGGAACCCACTTCAGAAATTGTTGTCGCGAACTTGGATCAAGATATGAACTTTGAGTCTCCCATCAATGAACGGCAAATGGAAGATAGCTTGACTGAAAAAAATGCAGTTCAAGATTCAACTCAGCAAGATAGTCCACATTTACCTTTGGATGGAGAAGTTGAAGAAATTGACGATGATATTGAAGTTATAGATGCACAGATGATTACTTATCTGGATAACATTGGCTCGATATCTGTAAATGAGCAAGATGTTATTCCATCTGAAACCTATAAGGAAAAAGATGATCCGACCTTGTCTGTTGAGGGATTTGATCAGTCTGGGATTGTTTTGGAAGGAGCTTCTCATGGCCCTTTACTTCCTTCATCTGGCAATAAAAAAATCCCCGAATCTGAGAAGAATGAAAATTCTGTTTGCCACAATACTGATGAGCAGTTTAAGACTAATGAAGACAATGGTAATAAGAATGAGATGAAAACTGGTTCAGATGGCTTGAAGGATGTACCTGTCAGTACGAATGTCCAAGAGAAGGTAGGAAAACACATTGAAAGTGTTGACCATGAGACCGATAATGTGAAGGAGTTCCATGAACTTGGGTTCGCTGAAATAGGTATGCTTGAGTATGATCATGATCTTACAAGTGGTCAAGATTCTGTTCCACTGCCTGATGTGCAAAAACCTGATTTGGTAAGCAACACAGACACAGTGATGCAAGGGACAAATACCTCCGCAGTTGAGATCGAACCACAACGAGTTACGATAGATATGGATGGCAGAAATCAGCTTAAAACTGTGTGTGTATGGTGTGGAGTAGAGTTCAACCATGAGGCTGCAAATTCTGAAATACAACCAGATTCTGTTGGATTCATGTGTCCAGCTTGTAAGGCGAAAATCTCTGGTCAAATAAGTGTGTTAGACAGTGGGATCACCGAATGCTGA 2448 0.4824 MAAAAATPRAPPPQQLLNLESIARIDSSTLSQSELHALSLSSLSPFDLRSSDHHLVTPKIDPAMFNESAGSRRQTYSRPRRPQSSPTGRRRRVTGLLPAAKVPSLPADDSENVENRVIIDYLKQFIREDPKFDQIEFAPPSVPAQVAENGVAAAEGSELAIVKFGERKRKRGRKPKVKVHLDLEECYRGMEIVNKNGVAIDLAALAEREDPFAEELRRRTEGLKGEEELLGFLSDLEGQWGSRRKKRRIVDAAGFGDVLPLGWKLLLGLKRKDGHAWVYCRRYMSPSGQQFVSCREVSSYLQSLLGHGDPQLQIGYRNENITQEHGTTTGNFVGVTHEDQDDRQIVPFNYDVPISSDSNERLKEVALLGMENLADVEIRDLFECHKCNMAFDDKDSYLQHLLSLHQRITRRYRLGSSVGDGVIIKDGKFECQFCHKVFLERRRYNSHVGIHVRSYVRRAEDSPGQASDQRQVKSPIREDMPSRLSKMDALIEIAQNSIMEDSVMEPTSEIVVANLDQDMNFESPINERQMEDSLTEKNAVQDSTQQDSPHLPLDGEVEEIDDDIEVIDAQMITYLDNIGSISVNEQDVIPSETYKEKDDPTLSVEGFDQSGIVLEGASHGPLLPSSGNKKIPESEKNENSVCHNTDEQFKTNEDNGNKNEMKTGSDGLKDVPVSTNVQEKVGKHIESVDHETDNVKEFHELGFAEIGMLEYDHDLTSGQDSVPLPDVQKPDLVSNTDTVMQGTNTSAVEIEPQRVTIDMDGRNQLKTVCVWCGVEFNHEAANSEIQPDSVGFMCPACKAKISGQISVLDSGITEC* 816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g0798 815 PANTHER METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 8 677 806 IPR037472 -
Aev04g0798 815 MobiDBLite consensus disorder prediction 532 554 - -
Aev04g0798 815 ProSitePatterns Zinc finger C2H2 type domain signature. 431 451 IPR013087 -
Aev04g0798 815 Gene3D Classic Zinc Finger 370 453 - -
Aev04g0798 815 PANTHER METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 8 16 685 IPR037472 -
Aev04g0798 815 SUPERFAMILY DNA-binding domain 257 307 IPR016177 GO:0003677
Aev04g0798 815 ProSitePatterns Zinc finger C2H2 type domain signature. 384 405 IPR013087 -
Aev04g0798 815 PANTHER METHYL-CPG-BINDING DOMAIN PROTEIN 16 685 - -
Aev04g0798 815 ProSiteProfiles Zinc finger C2H2 type domain profile. 382 405 IPR013087 -
Aev04g0798 815 PANTHER METHYL-CPG-BINDING DOMAIN PROTEIN 677 806 - -
Aev04g0798 815 MobiDBLite consensus disorder prediction 68 83 - -
Aev04g0798 815 ProSiteProfiles Zinc finger C2H2 type domain profile. 429 451 IPR013087 -
Aev04g0798 815 MobiDBLite consensus disorder prediction 59 95 - -
Aev04g0798 815 SMART c2h2final6 429 451 IPR013087 -
Aev04g0798 815 SMART c2h2final6 382 405 IPR013087 -
Aev04g0798 815 MobiDBLite consensus disorder prediction 618 671 - -
Aev04g0798 815 MobiDBLite consensus disorder prediction 457 479 - -
Aev04g0798 815 MobiDBLite consensus disorder prediction 536 550 - -
Aev04g0798 815 MobiDBLite consensus disorder prediction 631 665 - -
Aev04g0798 815 ProSiteProfiles Methyl-CpG-binding domain (MBD) profile. 249 321 IPR001739 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g0798 Aev-Chr4 4900377 4903797 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Aev04g0798 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g0798 - - adu:107468625 973.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g0798 04 4900377 4903797 Aev04g0798 04 4900377 4903797 ECH