Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g0766 ATGACGAAACAGAAGATAGAAATAAAGAGGATAGACAACATTGCAGCAAGACAGGTGGCTTTTTCTAAGAGGAGGAGAGGGTTGTTTAAGAAGGCAGAGGAGCTTTCAACTCTTTGTGATGCTGAGCTTGCTCTCATAGTCTTTTCTTCCACCGGCAAGCTCTTTGAATACTCTAGCTCAAGCCTGCAACAGGTAGTGGAAAGGCACAACAATCTGCATTCTGGCCTTGACAAATCGTATCATCATCCATCTATTGAGCTGCAGATGCGCAACGAAGTAGCAGATAAGACTCATGAACTGAGGCAGTTAAATGGTGAAGAGCTTGAAGGATTGAAATTTCAAGAATTAATGAAACTTGAGGAACGTCTAGTAAAGGGTTTGACCCGTGTTTTAAAAGCAAAGGATGAAAGAATGGCTAATGATATCACTGGGCTCACCAAAAAGGGAATGAATCTAATGCAAGAAAATCGAAGATTGTTACAGATTGCTGACAAACGAGGGCACACATGCAACTTGGGGTAG 522 0.4195 MTKQKIEIKRIDNIAARQVAFSKRRRGLFKKAEELSTLCDAELALIVFSSTGKLFEYSSSSLQQVVERHNNLHSGLDKSYHHPSIELQMRNEVADKTHELRQLNGEELEGLKFQELMKLEERLVKGLTRVLKAKDERMANDITGLTKKGMNLMQENRRLLQIADKRGHTCNLG* 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g0766 173 Gene3D - 13 86 IPR036879 GO:0003677|GO:0046983
Aev04g0766 173 PANTHER SERUM RESPONSE FACTOR HOMOLOG 1 161 - -
Aev04g0766 173 ProSiteProfiles MADS-box domain profile. 1 61 IPR002100 GO:0003677|GO:0046983
Aev04g0766 173 Pfam K-box region 88 161 IPR002487 GO:0003700|GO:0005634|GO:0006355
Aev04g0766 173 SMART madsneu2 1 60 IPR002100 GO:0003677|GO:0046983
Aev04g0766 173 ProSiteProfiles K-box domain profile. 79 172 IPR002487 GO:0003700|GO:0005634|GO:0006355
Aev04g0766 173 PANTHER MADS-BOX PROTEIN AGL24-LIKE ISOFORM X1 1 161 - -
Aev04g0766 173 SUPERFAMILY SRF-like 3 89 IPR036879 GO:0003677|GO:0046983
Aev04g0766 173 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 10 57 IPR002100 GO:0003677|GO:0046983
Aev04g0766 173 PRINTS MADS domain signature 3 23 IPR002100 GO:0003677|GO:0046983
Aev04g0766 173 PRINTS MADS domain signature 23 38 IPR002100 GO:0003677|GO:0046983
Aev04g0766 173 PRINTS MADS domain signature 38 59 IPR002100 GO:0003677|GO:0046983
Aev04g0766 173 CDD MADS_MEF2_like 3 75 IPR033896 GO:0000977|GO:0045944
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g0766 Aev-Chr4 4719581 4722568 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g0766 1 161 MADS-box Gene Family AT2G22540 57.059 1.81e-61 188
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-MIKC Aev04g0766 K-box 2.6e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g0766 - - ahf:112784740 267.314
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g2144 03 23787583 23791344 Aev04g0766 04 4719581 4722568 PCT