Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g0765 ATGAGGAAACAGGAGGAGGAGGAGGAGCATCATGAGAAGATAGAGCTGAGGAGGGTAGAGAAGATAGCAGCAAGGCAGGTAGCATTTAGCAAGAGAAAGAGAGGGCTTTTCAACAAGGCTCAGGAGCTTTCTACTCTTTGTGATGCTCAGATTTCTCTTATTGTCTTCTCTGATCATGGCAACCTCTTTCAATACTCTTCTACCAACTCCAGTGAACAGCAATTATTTGAAAAGTACGATCTATATACAAGCATTTACAGATTACAACCACCATCTGAAGAAATGCAGCTTGAGAGGGATACCTACAACATCATGCGCAACCAAGTGGCAGATAAGACTCATGAACTGAGGCAGATGAATGGGGAAGAGCTGCAAGGATTGAAAATTCAGGAATTACAGAAACTAGAGAAACTACTGGGAAAAGGTTTGAGCCGTGTTTCAAAAGCAAAGGATGAAAGCCTTAGAAAGGATATCAGTGACCTCAAGAAAAAGGGAGTTGAACTAGCTGAAGACAACCGACGACTGAAACACATACGAAGTGTTGGAAACGATCAAGGGCAATCATCTAAGTCAACTATGATTTGCAGCGGCCAATCAAACATTATTGCTCCTCAAAACTCTGATCATAATTATGATGCTTCTCTCAACTTGGGGTTGGCTATGTTTAAATGGAATAAAGAAGTCTGA 687 0.4148 MRKQEEEEEHHEKIELRRVEKIAARQVAFSKRKRGLFNKAQELSTLCDAQISLIVFSDHGNLFQYSSTNSSEQQLFEKYDLYTSIYRLQPPSEEMQLERDTYNIMRNQVADKTHELRQMNGEELQGLKIQELQKLEKLLGKGLSRVSKAKDESLRKDISDLKKKGVELAEDNRRLKHIRSVGNDQGQSSKSTMICSGQSNIIAPQNSDHNYDASLNLGLAMFKWNKEV* 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g0765 228 PRINTS MADS domain signature 31 46 IPR002100 GO:0003677|GO:0046983
Aev04g0765 228 PRINTS MADS domain signature 11 31 IPR002100 GO:0003677|GO:0046983
Aev04g0765 228 PRINTS MADS domain signature 46 67 IPR002100 GO:0003677|GO:0046983
Aev04g0765 228 PANTHER MADS-BOX PROTEIN AGL24-LIKE ISOFORM X1 11 192 - -
Aev04g0765 228 Gene3D - 23 82 IPR036879 GO:0003677|GO:0046983
Aev04g0765 228 ProSiteProfiles K-box domain profile. 95 186 IPR002487 GO:0003700|GO:0005634|GO:0006355
Aev04g0765 228 SMART madsneu2 9 68 IPR002100 GO:0003677|GO:0046983
Aev04g0765 228 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 18 65 IPR002100 GO:0003677|GO:0046983
Aev04g0765 228 PANTHER SERUM RESPONSE FACTOR HOMOLOG 11 192 - -
Aev04g0765 228 SUPERFAMILY SRF-like 12 100 IPR036879 GO:0003677|GO:0046983
Aev04g0765 228 Pfam K-box region 98 177 IPR002487 GO:0003700|GO:0005634|GO:0006355
Aev04g0765 228 ProSiteProfiles MADS-box domain profile. 9 69 IPR002100 GO:0003677|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g0765 Aev-Chr4 4711796 4716188 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g0765 12 219 MADS-box Gene Family AT2G22540 41.597 1.35e-50 163
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-MIKC Aev04g0765 K-box 1.9e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g0765 - - ahf:112786765 186.808