Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g0746 ATGGGGAGAGGAAAAATAGCGATTCGAAGAATCGACAATTCGACAAGCCGTCAAGTGACTTTCTCGAAGAGAAGAAGTGGATTGTTGAAGAAAGCTAAAGAATTGTCCATTCTCTGTGATGCTGAAGTTGGCTTGGTTGTCTTCTCCAGTACTGGCAAGCTTTATGACTATGCAAGCACCAGGAAAGCATTTGCTGCATTTGGACGGTGTGTGCCTTATGGGGATGCTTTCCGGGATTGA 240 0.45 MGRGKIAIRRIDNSTSRQVTFSKRRSGLLKKAKELSILCDAEVGLVVFSSTGKLYDYASTRKAFAAFGRCVPYGDAFRD* 80
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g0746 79 ProSiteProfiles MADS-box domain profile. 1 61 IPR002100 GO:0003677|GO:0046983
Aev04g0746 79 PANTHER AGAMOUS-LIKE MADS-BOX PROTEIN AGL16 1 62 - -
Aev04g0746 79 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 10 57 IPR002100 GO:0003677|GO:0046983
Aev04g0746 79 SMART madsneu2 1 60 IPR002100 GO:0003677|GO:0046983
Aev04g0746 79 SUPERFAMILY SRF-like 2 63 IPR036879 GO:0003677|GO:0046983
Aev04g0746 79 ProSitePatterns MADS-box domain signature. 3 57 IPR002100 GO:0003677|GO:0046983
Aev04g0746 79 PRINTS MADS domain signature 38 59 IPR002100 GO:0003677|GO:0046983
Aev04g0746 79 PRINTS MADS domain signature 3 23 IPR002100 GO:0003677|GO:0046983
Aev04g0746 79 PRINTS MADS domain signature 23 38 IPR002100 GO:0003677|GO:0046983
Aev04g0746 79 PANTHER SERUM RESPONSE FACTOR HOMOLOG 1 62 - -
Aev04g0746 79 CDD MADS_MEF2_like 2 60 IPR033896 GO:0000977|GO:0045944
Aev04g0746 79 Gene3D - 13 69 IPR036879 GO:0003677|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g0746 Aev-Chr4 4614054 4617640 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g0746 1 60 MADS-box Gene Family AT2G14210 91.667 5.49e-35 117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-M-type Aev04g0746 SRF-TF 7.1e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g0746 K09264 - gmx:100805092 114.005
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g2118 03 23661959 23664840 Aev04g0746 04 4614054 4617640 PCT