Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g0729 ATGGATACTATATCCTCAGCTCTTTTGGTAGATAGAGAGAAGAGTTTTCTTATGGAGATTTCATCCATCAGAGAGTTACCTGAACTGGGTATAATGGATGATCCTAGCTTTCTCCATCAGTGGCACTTGAATTCTTTTGACAGCTATAGCTTAGCAGCTGCTACTTTTGGGGACACCTTACAAAAACATTCATTATTCTCTAATGATAACACAAACTTCATCCCCAAAACTTTCATGGAAACATCACCAAGTGTGGTCGAAAAACAGGTCAAAACCAGCAGCTGGAACCACAACAGCACTAGTACTGCTCCTTCTTCTGAGACATCATCAGATCAGTCACAATTCGGCTCTTGCTCAAATCTTCTTTCATTTGTTGATTGTACAAATTACACAAGTCACCAACTTGGACTAGTGAAGCCTAAGGTGGAGATGGTGATGAGTCCTAAAATAGATACCACAACAACAACTACTCCTGCAGATCACATGTTGATCTCTCAAAACTTTGGGAATCAGAATTATGTCTTCAAAGCCTGTCATGAGGCCAAGAATAATATCGCGGTGCGGCCTAGAATTTCTCAAGCTCATGATCACATAATAGCTGAAAGGAAGCGCCGAGAGAAGCTTAGCCAGAGGTTCATTGCTCTATCAGCACTTGTTCCTGGCCTCAAAAAGATGGACAAAGCTTCTGTTCTTGGAGATGCTATAAAGTACTTGAAGCAAATGCAAGAGAAAGTGAGTGCTCTTGAGGAGGAACAGAACAGGAAGAAAACTGTGGAATCTGTGGTAGTTGTGAAGAAATCTCAACTATCTAACAATGATTCTGAAGACTCTTGTTTAGACACCTTTGATGAGGCACTTCCCGAAATTGAAGCAAGATTTTCCGAAAGAAATGTCCTAATACGAGTTCACTGCGAGAAGAACAAAGGAGTCATAGAAAAAACAATCAATGAAATTGAGAAGCTTCACCTTAAAGTCATCAATAGCAATGCCTTGACATTTGGGAGTTTTGCTCTTGATATTACCATTATTGCTCTGATGGATATGGAATTTTCCATGACAGTGAAGGAGCTTGTGAGGAACCTACGCTCAGCTTTTGCATCTTTCATGTGA 1110 0.4036 MDTISSALLVDREKSFLMEISSIRELPELGIMDDPSFLHQWHLNSFDSYSLAAATFGDTLQKHSLFSNDNTNFIPKTFMETSPSVVEKQVKTSSWNHNSTSTAPSSETSSDQSQFGSCSNLLSFVDCTNYTSHQLGLVKPKVEMVMSPKIDTTTTTTPADHMLISQNFGNQNYVFKACHEAKNNIAVRPRISQAHDHIIAERKRREKLSQRFIALSALVPGLKKMDKASVLGDAIKYLKQMQEKVSALEEEQNRKKTVESVVVVKKSQLSNNDSEDSCLDTFDEALPEIEARFSERNVLIRVHCEKNKGVIEKTINEIEKLHLKVINSNALTFGSFALDITIIALMDMEFSMTVKELVRNLRSAFASFM* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g0729 369 PANTHER BHLH TRANSCRIPTION FACTOR 19 368 - -
Aev04g0729 369 SMART finulus 198 247 IPR011598 GO:0046983
Aev04g0729 369 MobiDBLite consensus disorder prediction 89 112 - -
Aev04g0729 369 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 192 241 IPR011598 GO:0046983
Aev04g0729 369 Coils Coil 231 258 - -
Aev04g0729 369 Pfam Helix-loop-helix DNA-binding domain 197 242 IPR011598 GO:0046983
Aev04g0729 369 Gene3D - 184 257 IPR036638 GO:0046983
Aev04g0729 369 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 197 256 IPR036638 GO:0046983
Aev04g0729 369 PANTHER SYMBIOTIC AMMONIUM TRANSPORTER 19 368 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g0729 Aev-Chr4 4486462 4489186 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g0729 18 369 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 39.944 1.71e-62 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aev04g0729 HLH 7.4e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g0729 - - gmx:100798018 446.817
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g0729 04 4486462 4489186 Aev04g0729 04 4486462 4489186 ECH
Aev03g2103 03 23589517 23594786 Aev04g0729 04 4486462 4489186 PCT