Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g0711 ATGGGTTCCCCGGAAAATCCAAATTGGATGTTGGATTACGGTTATTTAGATGACATTACCGTCCCCTGTTTTGACTCTGTTCCTGACCCTCCCAATTTCTCTTGGTCTACCCCTGCTCCTCCTCCTCCTCTTCCTCTTCCTCCAATCACCCTCTGTGTGGAGCAAGATGACTCTTATGGAAATTCTGATGGTTTCAAGGAATCTGGTTCAAGGAAAAGGTTGAGGCCGGCAGGATCCAGCAACCCATCTGGTTCAAAAGCATGTAGAGAGAAAATGCGAAGGGATCGACTAAATGACAGATTTTTGGAACTTGGTACTATGTTGGATCCTGGAAGGCCTCCCAAAATGGATAAGGTTGCCATATTAAGTGATGCAGTTCGAATGGTGGCACAGTTACGAGAAGAGGCTCAGAAACTTCGAGAGTCTACAGAGAATCTGCAGGGGAAAATCAATGAACTGAAGGCTGAGAAAAATGAGCTTCGTGATGAGAAGCAGCTACTAAAAGCAGAGAAAGATAACCTCGAGCAGCAGCTCAAAGCCTTGACTTCGCAGCCTGGCTTCATGCACCACCCTCCTACCCTCCCGGCTGCTTTTCCTGCTGCACCAGGACAAGTTGTTGGCAGCAAGCTTGTGCCTTTTATGGGCTACCCTGGAGTTTCCATGTGGCAGTTTTTACCACCTACTGCTGTGGATACCTCGCAGGACCATGTACTCCGGCCCCCAGTTGCATAA 732 0.4836 MGSPENPNWMLDYGYLDDITVPCFDSVPDPPNFSWSTPAPPPPLPLPPITLCVEQDDSYGNSDGFKESGSRKRLRPAGSSNPSGSKACREKMRRDRLNDRFLELGTMLDPGRPPKMDKVAILSDAVRMVAQLREEAQKLRESTENLQGKINELKAEKNELRDEKQLLKAEKDNLEQQLKALTSQPGFMHHPPTLPAAFPAAPGQVVGSKLVPFMGYPGVSMWQFLPPTAVDTSQDHVLRPPVA* 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g0711 243 Pfam Helix-loop-helix DNA-binding domain 85 132 IPR011598 GO:0046983
Aev04g0711 243 Gene3D - 85 163 IPR036638 GO:0046983
Aev04g0711 243 MobiDBLite consensus disorder prediction 30 94 - -
Aev04g0711 243 CDD bHLH_AtILR3_like 86 161 - -
Aev04g0711 243 PANTHER TRANSCRIPTION FACTOR ILR3-LIKE 3 243 - -
Aev04g0711 243 Coils Coil 122 184 - -
Aev04g0711 243 PANTHER BHLH TRANSCRIPTION FACTOR 3 243 IPR044818 GO:0003700|GO:0006355|GO:0046983|GO:0055072
Aev04g0711 243 SMART finulus 87 138 IPR011598 GO:0046983
Aev04g0711 243 MobiDBLite consensus disorder prediction 33 49 - -
Aev04g0711 243 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 81 132 IPR011598 GO:0046983
Aev04g0711 243 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 87 160 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g0711 Aev-Chr4 4404133 4405882 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g0711 1 243 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G54680 58.607 8.32e-87 255
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aev04g0711 HLH 7.2e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g0711 - - nnu:104604927 302.367