Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g0666 ATGGGAAGAAAATCGGGTGAGGTGAAAGAGGAGTCTCTGCCGGACCACCTCCGGTGCAGCCGCACTGACGGGCGGCAATGGCGGTGCCGGCGGCGCGTGATGGACAGCCTCAAGCTCTGCGAGATTCACTACCTTCAAGGTCGCCACCGTCAGTACAAGGAGAAGGTCCCTGACTCACTGAAGCTTCAGAGAACAACGAGCAACAAGAAGAAAGGGCACAGTTCCAAAAACGACGTCGTTATGAAGACCATGGAAATTAGGGCGAGGATTTCCAAAATTTTGAAGAAGCAGAAGCGGAAGCGGAAATCAACAGAGCGTTCTGATGCAGCAGCAGCATTGTTTAGTGTTGGTCCAAAGAAGAAGAAGAAGAATCATGATATGCAGTTGGAGCTTATAAGGATGGTTCTGCAGAGAGAGGTTGAGAAGAACAAGAGGAAGAGCGAGAAGGAGGAGAGAGAGGAGTTGCATCGATATTACAGTGAGGGTGAGTTGAGGAGGGAATTACCCAATGGTGTGATGGAGATTGCCCCTGCTCCTTCAACCCCACATGATTACACCAATGTGGGTTCCTATTGTGATGTAAAAGTTGGAATCTTTGATCATAGTAGAGCTGTTACTCCTCGTTACTTCAGGTCCAAGAATGTTGATAGGCTCCCTGTTGGCAAGTTGCAGGTTGTGCCTTATGGAGTGAGCTTGAAGAAGGGTAAGAGAAAGAAGTGTCATTGGTGCCAAAGAAGTGATTCCTGGAATCTTATCAAGTGCAATAGCTGCCAGAAAGAGTTCTTCTGCATGGATTGCATTAAAGAACGGTATTTTGACACTCAAAATGAAGTTAAGATGGCATGTCCAGTTTGTAGACGAACTTGCAACTGTAAAGATTGCTTGGCAATTCAATGCAAAGACAGTGAAAGTAAGGAATATTTTGCTGGTAGAAACAGAGTAGATAGAATATTGCATTTTCATTATTTGATCTGTATGCTGCTTCCTGTACTAAAACAAATAAGTGAAGACCAGAATGCAGAGATAGAAACAGAAGCAAAAATTCAAGGGAAAAGAATTTCTGATATTCTCATCAAGCAGGTTGAATTCGGATGCAATGAGAAGAATTACTGCAATTACTGCAAAACTCCCATCTTGGATCTTCATAGAAGCTGCCTTAGTTGCTCCTACAGCCTTTGCTTAAGTTGTTGTCAGGAATTAAGTCAAGGAAGCACCACTGGAGAAACTAACTCTTCTTTGCTCAAGCTACCTGACAAAATGAACGGTTGCACTGACCTTTTGGATGATGGGGCCATATCTTGCAGAAACTCAACTGCCTCTTCAATATTGCCTGAATGGCCAAGTCATGATGGTACTAACAGTCTATCGTGTCCACCTACAGAGCTAGGCGGTTGTGGTGATAGCCACCTTGATTTGAGATGTGTTTTACCCTTAAGTTGGATCAAAGAGATGGAAGCAAAGGCAGAAGAAGTAGTTTGCAGCTATGACTTCCCTGAAATTTTGGATAAAAGTTCAAGCTGCTCACTGTGTATCGACAAAGATCAGAAAACTCACAGATATAAGCAGTTGCAAGAAGTGGCTCAAAGAGAAGATTCCAATGATAATTGCTTGTTTTATCCTACAGTTTTGGACATCACTGGTGATCATTTTGAACACTTTCAGAAACATTGGGGAAAAGGACATCCTATAGTAGTGCATGATGCACTCCAAAGTACATCAAACCTCAGTTGGGATCCACTGGTCATGTTCTGCGCATATCTTGAGAGGAGCATTACAAGATATGAGAATAATAAGGACTTACTTGAAGCTTGTTTGGATTGGTGTGAGGTGGAAATCAACATTAGGCAGCATTTCACTGGGTCTCTCAAATGTCAGCCCCAGAGAAATGCTTGGCATGAGATGTTGAAAATAAAAGGGTGGTTGTCTTCCCAGTTATTCAAAGAACAGTTTCCAGCTCATTTCGCTGCAGTAATTGATGCTCTGCCAATTCAAGAATACATGAATCCCATGTCTGGTTTTCTGAACTTAGCTGCAAATTCGCCACAGGGGAGTACAAAACATGACATGGGACCGTATGTCTATATTTCATATGGCTGTGCTGACAAAGAAGCTGATTCTGTGACAAAACTCTGTTATGACTCATATGATGTGGTTAACATTATGGCACATACCACAGATGGTCCCTTCTCTACAGAACAGCTTAGTAAAATACGCAAATTATTGAAAAAGCACCAAGCTCTATGTCGAAGGGACTCTTCCAAAATTACTACTGAGCAGGCTGAAGACATGGAACAAAAAGGGCTTCAAAGTTTTGGAAGAGAAGGATTGGACTTTTTCAGGAGAGTCAACAGAACATCTTGCATCTCTACTGAGGCCACAGCTACTAGTCAGAGTTTAGAAACCAATACTTCAGGGCAATGTGGTTTAGATTCTGATGCCGAAAAAGGTCAAAGCTGTTCACCAATCTGCAGGACTGTTCAAAGCATTGACATGTCTCCAGATCATAATCCAAGAAAAACCTTGGAAAAATCAACCAGTGATAAAGGCAAGTTTACTGAGAATTCTGGCGCCCAGTGGGATGTCTTTCGAAGAGAAGATGTACCGAAGCTTCAGGAATATCTTAAAAGGCACCGTGATGAATTTTCATATATTCATGAACATCAGGATGAGATGGTTCATCCAATTCTTGACCAGAGCACCTTTCTTGACAATACGCACAAAAAGAGACTAAAGGAGGAATTTAACATCGAACCATGGACTTTTGAGCAACATGTCGGAGAAGCCGTCATCATTCCTGCTGGATGTCCATACCAGATAAGGAATCCTAAGTGTTGTGTTCATGTGGTGCTGGAATTTGTGTCCCCTGAGAATGTTGCTGAGTGCATTCAATTGATCGATGAAGTTCGTCTACTTCCAAAAGACCATATAGCAAAAGTGGACAAGCTGCAGGTAAAGAAAATGGCCCTCTATAGCATGAATACAGCAATAAAAGAAATACGTGAGCTTACATGCAAGACTTGA 3021 0.425 MGRKSGEVKEESLPDHLRCSRTDGRQWRCRRRVMDSLKLCEIHYLQGRHRQYKEKVPDSLKLQRTTSNKKKGHSSKNDVVMKTMEIRARISKILKKQKRKRKSTERSDAAAALFSVGPKKKKKNHDMQLELIRMVLQREVEKNKRKSEKEEREELHRYYSEGELRRELPNGVMEIAPAPSTPHDYTNVGSYCDVKVGIFDHSRAVTPRYFRSKNVDRLPVGKLQVVPYGVSLKKGKRKKCHWCQRSDSWNLIKCNSCQKEFFCMDCIKERYFDTQNEVKMACPVCRRTCNCKDCLAIQCKDSESKEYFAGRNRVDRILHFHYLICMLLPVLKQISEDQNAEIETEAKIQGKRISDILIKQVEFGCNEKNYCNYCKTPILDLHRSCLSCSYSLCLSCCQELSQGSTTGETNSSLLKLPDKMNGCTDLLDDGAISCRNSTASSILPEWPSHDGTNSLSCPPTELGGCGDSHLDLRCVLPLSWIKEMEAKAEEVVCSYDFPEILDKSSSCSLCIDKDQKTHRYKQLQEVAQREDSNDNCLFYPTVLDITGDHFEHFQKHWGKGHPIVVHDALQSTSNLSWDPLVMFCAYLERSITRYENNKDLLEACLDWCEVEINIRQHFTGSLKCQPQRNAWHEMLKIKGWLSSQLFKEQFPAHFAAVIDALPIQEYMNPMSGFLNLAANSPQGSTKHDMGPYVYISYGCADKEADSVTKLCYDSYDVVNIMAHTTDGPFSTEQLSKIRKLLKKHQALCRRDSSKITTEQAEDMEQKGLQSFGREGLDFFRRVNRTSCISTEATATSQSLETNTSGQCGLDSDAEKGQSCSPICRTVQSIDMSPDHNPRKTLEKSTSDKGKFTENSGAQWDVFRREDVPKLQEYLKRHRDEFSYIHEHQDEMVHPILDQSTFLDNTHKKRLKEEFNIEPWTFEQHVGEAVIIPAGCPYQIRNPKCCVHVVLEFVSPENVAECIQLIDEVRLLPKDHIAKVDKLQVKKMALYSMNTAIKEIRELTCKT* 1007
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g0666 1006 SUPERFAMILY Clavaminate synthase-like 550 989 - -
Aev04g0666 1006 SMART cupin_9 650 969 IPR003347 -
Aev04g0666 1006 Pfam WRC 14 55 IPR014977 -
Aev04g0666 1006 ProSiteProfiles Zinc finger RING-type profile. 240 286 IPR001841 -
Aev04g0666 1006 MobiDBLite consensus disorder prediction 829 851 - -
Aev04g0666 1006 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 9 1005 IPR045109 GO:0032454|GO:0033169
Aev04g0666 1006 MobiDBLite consensus disorder prediction 835 849 - -
Aev04g0666 1006 Pfam JmjC domain, hydroxylase 855 950 IPR003347 -
Aev04g0666 1006 ProSiteProfiles WRC domain profile. 13 59 IPR014977 -
Aev04g0666 1006 MobiDBLite consensus disorder prediction 52 79 - -
Aev04g0666 1006 Gene3D Cupin 542 978 - -
Aev04g0666 1006 Coils Coil 133 153 - -
Aev04g0666 1006 ProSiteProfiles JmjC domain profile. 669 969 IPR003347 -
Aev04g0666 1006 PANTHER PROTEIN B160 9 1005 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g0666 Aev-Chr4 4150609 4156099 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g0666 14 53 GRF Transcription Factor Family AT2G22840 50.000 5.43e-06 48.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Aev04g0666 JmjC 2.5e-10 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g0666 K15601 - gmx:100810673 1374.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g2063 03 23360957 23365663 Aev04g0666 04 4150609 4156099 PCT