Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g0663 ATGGGGAGAGCACCTTGTTGTGAGAAGAATGGGCTCAAGAAAGGGCCATGGACGCCAGAGGAGGACCAGAAACTCATTGATTACATTCACAAACATGGTTATGGAAACTGGAGAACTCTCCCAAAGAATGCTGGGTTGCAAAGATGTGGAAAGAGTTGCCGACTGCGGTGGACTAACTATCTCCGGCCAGATATAAAGCGAGGCCGGTTTTCATTTGAAGAGGAAGAGACAATTATTCAGCTACATAGCATTCTTGGCAACAAGTGGTCTGCTATTGCATCAAGATTACCAGGAAGAACGGACAATGAAATAAAGAACTACTGGAACACACATATAAGGAAGAGGCTTCTCAGGATGGGAATTGATCCTGTCACACACAGTCCAAGACTTGACCTATTGGACCTATCTTCCATCCTAACCTACTCCTCTCTCTATGCTTCTTCTTCTTCATCATCACAAATCAGCATCCAAAGGCTCCTTACGATGCACCCTGACCTTCTCAAATTGGCCTCCTCACTCATCTCTCCCCCTCAAAATAATAATAATGAAATTCAGAACCACCAAAACAACTTTGTCCATCAACAATTGAACAACCCTTGTGATGTTTCATCAGCATTGCCTTCTTTGACTCAACCACAACAATTGGTTGATGTGAATGTGAACAGCAACACATCATCAAATTATCTCACCGACCATCATTATTGCTACCAACAACAAAGGCATACATGTGATGATCATCAAATTGCTGCTGCTGCTTTAAGCACTTCCTTAACAGAGGACGACTACAATAACAGCATCCCTCATCCTCAATTATCAAGCTATACTAATAACAATTATTACTGTAGTTCTGATAATAACAGTCATCAGAATCATCTCATCATTGATCCTTCACTACTGTCCGAAGCTGCTTCAACCTTCCATTCAAATAATAACTTCAGCTTTGCTTCGGTTATGTCAACACCTTCTTCAAGCCCCACTACAGAGGATGAGAGAGATAGCTATGGGAGTAGCAATAATAACATTTTCAAATTTGAAATCCCTGATCTTTTAGATGTCACTCACTTCATGTACTCACAATAA 1080 0.412 MGRAPCCEKNGLKKGPWTPEEDQKLIDYIHKHGYGNWRTLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFSFEEEETIIQLHSILGNKWSAIASRLPGRTDNEIKNYWNTHIRKRLLRMGIDPVTHSPRLDLLDLSSILTYSSLYASSSSSSQISIQRLLTMHPDLLKLASSLISPPQNNNNEIQNHQNNFVHQQLNNPCDVSSALPSLTQPQQLVDVNVNSNTSSNYLTDHHYCYQQQRHTCDDHQIAAAALSTSLTEDDYNNSIPHPQLSSYTNNNYYCSSDNNSHQNHLIIDPSLLSEAASTFHSNNNFSFASVMSTPSSSPTTEDERDSYGSSNNNIFKFEIPDLLDVTHFMYSQ* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g0663 359 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Aev04g0663 359 CDD SANT 69 112 IPR001005 -
Aev04g0663 359 PANTHER TRANSCRIPTION FACTOR MYB41 1 351 - -
Aev04g0663 359 CDD SANT 16 61 IPR001005 -
Aev04g0663 359 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 351 - -
Aev04g0663 359 MobiDBLite consensus disorder prediction 317 337 - -
Aev04g0663 359 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Aev04g0663 359 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Aev04g0663 359 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Aev04g0663 359 Gene3D - 11 67 - -
Aev04g0663 359 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Aev04g0663 359 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
Aev04g0663 359 SMART sant 66 114 IPR001005 -
Aev04g0663 359 SMART sant 13 63 IPR001005 -
Aev04g0663 359 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 116 IPR017930 -
Aev04g0663 359 Gene3D - 69 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g0663 Aev-Chr4 4131987 4133303 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g0663 1 356 MYB Transcription Factor Family AT4G21440 50.128 8.45e-110 323
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Aev04g0663 Myb_DNA-binding 6.9e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g0663 K09422 - gmx:778071 362.844