Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g0649 ATGAACGACCTTTTCTCAAGCTCCTTCAAGAAATTCAATGGCATAAATGGGGAGACCAACTTTGATGACTTGGAGGCTGGGAGGGAAAGTGTCAACCTTGATAAATTCTTTGAAGATGTTGAGAATGTTAAAGAAGACATGGGAGTGGTTGAGAATCTTTATACGAAATTGCAAGAGGCCAATGAAGAGAGCAAATCTGTACACAATGCTAAAACCATGAAAGATCTTAGAGCCAGAATGGACAAAGACGTCGAGCAGGTCCTCAGACGTGTTAAGATCATCAAGGGCAAGCTCGAAGCGTTAGAGCGATCGAATGCAGAAAACAGAAAGCTTCCAGGGTGTGGTCCTGGTTCCTCTGAAGACAGAACAAGGTCTTCAGTTGTGAGTAGTTTGGGGAAGAAACTGAAGGACATGATGGATGAATTTCAACGGCTGAGAGTAAAGATTCAACATGAATACAAAGAAACTGTTGAAAGAAGGTATTTCACAGTAACAGGAGAGAAAGCAGATGAAGAGACCATAGAGAATTTGATATCAAGTGGTGAGAGTGAGAGCTTTCTGCAGAGAGCAATTCAGGAACAGGGTAGGGGTCAGATAATGGACACTATATCAGAGATTCAAGAGAGGCATGATGCTGTTAAGGGGATAGAGAAGAACTTGATTGAGCTGCATCAGGTGTTTCTGGACATGGCAGCACTTGTAGAGTCTCAGGGTCAGCATCTGAATAGCATTGAGAGCCATGTGGCACATGCAAGTTCTTTTGTTACAAGAGGAACAGGTCAACTTCAGGAAGCTAGAGATTATAAGAGAAGTTCAAGGAAATGGATGTGTTATGCCATACTTCTTGCCCTTATCCTCATCCTTGCCATCTTGGCTCCTCTCTTGGCAACATATCTGCCACGCTTGTCAAGGAGAATTTGA 921 0.43 MNDLFSSSFKKFNGINGETNFDDLEAGRESVNLDKFFEDVENVKEDMGVVENLYTKLQEANEESKSVHNAKTMKDLRARMDKDVEQVLRRVKIIKGKLEALERSNAENRKLPGCGPGSSEDRTRSSVVSSLGKKLKDMMDEFQRLRVKIQHEYKETVERRYFTVTGEKADEETIENLISSGESESFLQRAIQEQGRGQIMDTISEIQERHDAVKGIEKNLIELHQVFLDMAALVESQGQHLNSIESHVAHASSFVTRGTGQLQEARDYKRSSRKWMCYAILLALILILAILAPLLATYLPRLSRRI* 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g0649 306 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 203 265 IPR000727 -
Aev04g0649 306 PANTHER SYNTAXIN 11 294 IPR045242 -
Aev04g0649 306 SMART SynN_4 28 154 IPR006011 GO:0016020
Aev04g0649 306 PANTHER SYNTAXIN-124-RELATED 11 294 - -
Aev04g0649 306 CDD SNARE_syntaxin1-like 202 264 - -
Aev04g0649 306 Gene3D - 191 296 - -
Aev04g0649 306 Gene3D - 33 160 - -
Aev04g0649 306 SUPERFAMILY t-snare proteins 32 258 IPR010989 GO:0016020|GO:0016192
Aev04g0649 306 Coils Coil 84 104 - -
Aev04g0649 306 CDD SynN 33 190 IPR006011 GO:0016020
Aev04g0649 306 Pfam SNARE domain 241 291 IPR000727 -
Aev04g0649 306 MobiDBLite consensus disorder prediction 107 126 - -
Aev04g0649 306 SMART tSNARE_6 198 265 IPR000727 -
Aev04g0649 306 Pfam Syntaxin 35 238 IPR006011 GO:0016020
Aev04g0649 306 Coils Coil 50 70 - -
Aev04g0649 306 ProSitePatterns Syntaxin / epimorphin family signature. 209 248 IPR006012 GO:0005484|GO:0006886|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g0649 Aev-Chr4 4040837 4041757 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g0649 1 295 SNARE and Associated Proteins AT1G61290 72.542 7.27e-162 451
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g0649 K08486 - gmx:100818999 467.618
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g0649 04 4040837 4041757 Aev04g0649 04 4040837 4041757 ECH
Aev03g2044 03 23221117 23222022 Aev04g0649 04 4040837 4041757 PCT