LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aev04g0641	ATGTCCATTAACATTATTGGGGCAATCACTGGTGTTATTAGCTGCCTCTGTGCACAGAACTGCATCAATGAACCACTAGGCCAGAAGATTAGGCACCTCAGAAGACCCAAAAGGAACTTGAACAAGCTCAAGTCATTGACAGAGGAGCTAGATGCCCGGAAAGCGGACGTCTCCACTAAGCTAAATCAAATATGGCTTCAGAAAGGGATGAATCCAAGGACAGCAGTGGACCTGTGGCTGAAAAATGTTGATAAGACTGCTAGTGAAGTGAATAAACTCATAAGGGAAGTTGAACAAGAAAGTGGAGGCAGAGGTGTTTCCTCTCCATTTTATGTTGCTTCAAGAATAAAGATGGGAGAACTTATTGAGAAAAGGATGTTGGAGGTTAGAGAGCTTCTAGAGAAGGGCCAATTTGCAGATGATTCGTTGGCGGAAAATTCTCCTAGAAAAGGGCAGACTCTTCCTACAACAAAGCTGATGGAACATGAAACAACCATGAAAAGTTTGAACAAGATTTGGAGCTACATATTGGATGATAGGGTGAGAAAAATTGGTGTTTATGGGATGGGTGGCGTGGGGAAAACGACTATCATAACCGAAATTAACAATGGTCTTCTGAGAGAAAATAGGCTGTTTGATAGCATTATTTGGGTTAGTTCTCCAAAGGACATGAACCCTGAAAAGTTGCAAAAGGTTATTGCAGAGAAGTTTGATATAGACCTTTCAGGATTTCAGGATGAGACTTCAAGAGCTGCAGCACTGTTTGAAGCTTTCAAAAGAAGGAAGAAGTTTGCATTGATTCTTGATGATCTGTGGGAGCCATTCTCACTTGAAAGAGTTGGAATACCAATACCAACCATTGAGAATGGCTGCAAATTGCTAATAACTACTCGAAGGTTAAGCGTTTGCCGCGGCATGGAAACAGATAGGGATGTAAAAGTGAAGGTTCTTACAGACAATGAAGCATGGGATCTCTTCAGGGACAAAGTTGGAGATGAAGCACTGGCCTCTGCAGATATACAATTGATTGCAAAAAGTGTGGCTAAGGAATGCATGGGTCTGCCTCTTGGCATTATCACCGTGGGGCGAGCCTTGAGAAATGCGACTGATATTTCTGAATGGGAGATTTCATTGATGGGGTTAAGAGCTTCAGCAATCAATATAGAACAGATGGAAGAATCGGTTTTCTCTCGATTGAAGTTCAGCTTCACAAAATTGAAGGATGACACAAGTAGGTCTTGTTTTCTTTTCTGTGCTCTCTACCCGGAAGGTAATCACATTGATGCAGATGAGTTGATTGAGTATTGGATGTGGGAAGGTTTATTAGGCCCTGTGGATAGCATATCAACAAGCAAACAGAAGGGGGAAATCATAATGAATGAACTGAAGTATGCATGCATGTTGGAAAGTGATGCAGAGAATGTGATGGAATGTGTCAAATTGCATGATCTGATAAGAGATATGGCCATGACAATCATGAGAACAGATCCTCGTTGGCACTGCATCGTCAAAGCCGGCAATGGTTTGACGAAACCTCCTCACATCGATGAATGGACAGAAGGTGTTCATAGGGTGTCACTAATGAAGAATGACTTGAAAAACATTTTTCTTGGAAATCCTCCACCATGTCCTGGAGTGACTTCCTTGTTATTGCAGTACAATTCTTTCCCTCAAAATATACCATATGACTTCTTTGATTTCATACAAAGCCTAAAAGTTCTCGATCTCTCTTACACCGGGATCGATTCCCTGCCGGGATCGGTTTCTAACTTAGAGAGTCTATGTGCCTTGTTATTGAGCAATTGCTGGAATTTAAGATCAGTCCCTTCTCTAGCAAAACTGATCAAGTTGATGGATTTGGACCTTTCTTGTTCCCGAAACATAAGAGAACTTCCACATGGGACAGAGCAGTTAGGCAACCTGAGAAGGCTAAACATTTCCAATACCATGATCAAAACCTTGCCATCTGGTTTACTGTCAGCACTAACTCATCTGGAAGAATTATTGGCATCTAATGCTCTTGATGAAGTCAGTATTGATGAAGTCATATCATCCTCCTCAAGTTTGTCTTCACTCGAAGTTGATTTCGGGCATCTTGACCTCTATGATCTATATACTAGATCTGGTCACTGGACTCAGCTAGACAAGTTCAAGTTCAATGTTGGACCCGGAGAGCTCCAAGAAGTTTCAGAGAAAAGGAGTGTGGCATTTCTCAGCATATCTATTGCCAGAAGAGGGATTTCAATCCCAGAAAATACTACTGAGTTGAAGTTTATTGATTGTCATGATATCACAGAGCTACCTACTTGCCTGTTGCAAGTAGAGAAGCTTAAAAAATGTACAATAGTGTGCTGTTACAGTATAGAAAAAATTGTTGACCCAGGACAGAATGATCTTCCTATGTTGGAGACTTTGGTGCTGAGATATTTGATAAATCTGCAGATGATATGCAGTGAAGTGGTGACTCCATCGACACTCATGAGCCTCAAGATCATAAATGTAGAATGCTGTCCAAATTTGAAGAGCCTATTCTCAGGGAACCTGTTGCTGCAACTACTAAATGTTGAAGAAATTAGAGTCAGCAACTGTAACAGCATGGAGGATTTGATGAGATGGGAAGAAGGAGGAGAGAATATTGATGCTGCTAAAATCCAGTTGCCAAGATTAAGGAAGTTGAGGTTGGAATTTATGCCTAAGCTAAAGGGAATATATGGTGGATTCATCAGCTTTGGATCTCTCTGCTCTTTTCAAGTGATTTCTTGTGATGCACTCAAGAGGCTACCCTTTGATCTAGATGATGATGATGATGCAGTAGGCCTACTTCAGCAGCACCTGTTGGAAATCAAAGGATCAAAACAATGGTGGGAATCACTTGAGTGGGATCAACCTGATTTCAAGCAAATAATGGAACCATATTTCATAGAGCTGCCAATGGTGTCTTCATCAGATCAAGGTGCTAGCAGCAGCACTCATGAAGGATCAACTGATATTATTGAGCACTTTTAA	3006	0.4128	MSINIIGAITGVISCLCAQNCINEPLGQKIRHLRRPKRNLNKLKSLTEELDARKADVSTKLNQIWLQKGMNPRTAVDLWLKNVDKTASEVNKLIREVEQESGGRGVSSPFYVASRIKMGELIEKRMLEVRELLEKGQFADDSLAENSPRKGQTLPTTKLMEHETTMKSLNKIWSYILDDRVRKIGVYGMGGVGKTTIITEINNGLLRENRLFDSIIWVSSPKDMNPEKLQKVIAEKFDIDLSGFQDETSRAAALFEAFKRRKKFALILDDLWEPFSLERVGIPIPTIENGCKLLITTRRLSVCRGMETDRDVKVKVLTDNEAWDLFRDKVGDEALASADIQLIAKSVAKECMGLPLGIITVGRALRNATDISEWEISLMGLRASAINIEQMEESVFSRLKFSFTKLKDDTSRSCFLFCALYPEGNHIDADELIEYWMWEGLLGPVDSISTSKQKGEIIMNELKYACMLESDAENVMECVKLHDLIRDMAMTIMRTDPRWHCIVKAGNGLTKPPHIDEWTEGVHRVSLMKNDLKNIFLGNPPPCPGVTSLLLQYNSFPQNIPYDFFDFIQSLKVLDLSYTGIDSLPGSVSNLESLCALLLSNCWNLRSVPSLAKLIKLMDLDLSCSRNIRELPHGTEQLGNLRRLNISNTMIKTLPSGLLSALTHLEELLASNALDEVSIDEVISSSSSLSSLEVDFGHLDLYDLYTRSGHWTQLDKFKFNVGPGELQEVSEKRSVAFLSISIARRGISIPENTTELKFIDCHDITELPTCLLQVEKLKKCTIVCCYSIEKIVDPGQNDLPMLETLVLRYLINLQMICSEVVTPSTLMSLKIINVECCPNLKSLFSGNLLLQLLNVEEIRVSNCNSMEDLMRWEEGGENIDAAKIQLPRLRKLRLEFMPKLKGIYGGFISFGSLCSFQVISCDALKRLPFDLDDDDDAVGLLQQHLLEIKGSKQWWESLEWDQPDFKQIMEPYFIELPMVSSSDQGASSSTHEGSTDIIEHF*	1002

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aev04g0641	1001	Pfam	NB-ARC domain	168	403	IPR002182	GO:0043531
	Aev04g0641	1001	Coils	Coil	80	100	-	-
	Aev04g0641	1001	Gene3D	-	316	402	IPR042197	-
	Aev04g0641	1001	Gene3D	-	403	491	IPR036388	-
	Aev04g0641	1001	PANTHER	OS12G0491200 PROTEIN	25	963	-	-
	Aev04g0641	1001	SUPERFAMILY	L domain-like	481	928	-	-
	Aev04g0641	1001	MobiDBLite	consensus disorder prediction	981	1001	-	-
	Aev04g0641	1001	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	168	418	IPR027417	-
	Aev04g0641	1001	Gene3D	-	142	314	IPR027417	-
	Aev04g0641	1001	Gene3D	Ribonuclease Inhibitor	727	932	IPR032675	-
	Aev04g0641	1001	SMART	LRR_typ_2	568	591	IPR003591	-
	Aev04g0641	1001	SMART	LRR_typ_2	638	661	IPR003591	-
	Aev04g0641	1001	PANTHER	DISEASE RESISTANCE PROTEIN RP	25	963	IPR044974	GO:0006952
	Aev04g0641	1001	Gene3D	Ribonuclease Inhibitor	497	721	IPR032675	-
	Aev04g0641	1001	Pfam	Leucine rich repeat	544	602	IPR001611	GO:0005515
	Aev04g0641	1001	PRINTS	Disease resistance protein signature	351	365	-	-
	Aev04g0641	1001	PRINTS	Disease resistance protein signature	258	272	-	-
	Aev04g0641	1001	PRINTS	Disease resistance protein signature	589	605	-	-
	Aev04g0641	1001	PRINTS	Disease resistance protein signature	183	198	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aev04g0641	Aev-Chr4	4010391	4013396	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aev04g0641	181	843	WRKY Transcription Factor Family	AT5G45050	21.339	1.85e-12	69.7

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aev04g0641	K13459		-	aprc:113852063	959.903